RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 VPS52Q8N1B4 723 aa15.59■□□□□ 0.09
HDDC2-202ENST00000398153 MRPL43Q8N983 215 aaKnown RBP15.59■□□□□ 0.09
HDDC2-202ENST00000398153 STAMQ92783 540 aa15.59■□□□□ 0.09
HDDC2-202ENST00000398153 SNX27Q96L92 541 aa15.59■□□□□ 0.09
HDDC2-202ENST00000398153 ZBP1Q9H171 429 aa15.59■□□□□ 0.09
HDDC2-202ENST00000398153 TLE6Q9H808 572 aa15.59■□□□□ 0.09
HDDC2-202ENST00000398153 CITO14578 2027 aa15.59■□□□□ 0.09
HDDC2-202ENST00000398153 GOLGA6L4A6NEF3 574 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 KIAA0391O15091 583 aaKnown RBP15.58■□□□□ 0.08
HDDC2-202ENST00000398153 EFEMP2O95967 443 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 SOD2P04179 222 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 ADRB2P07550 413 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 EHHADHQ08426 723 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 HYAL1Q12794 435 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 ELAVL2Q12926 359 aaKnown RBP15.58■□□□□ 0.08
HDDC2-202ENST00000398153 PSMD2Q13200 908 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 HSP90AA2PQ14568 343 aaPredicted RBP15.58■□□□□ 0.08
HDDC2-202ENST00000398153 PUS10Q3MIT2 529 aaKnown RBP15.58■□□□□ 0.08
HDDC2-202ENST00000398153 KANK3Q6NY19 840 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 TMEM173Q86WV6 379 aaPredicted RBP15.58■□□□□ 0.08
HDDC2-202ENST00000398153 RNF168Q8IYW5 571 aaPredicted RBP15.58■□□□□ 0.08
HDDC2-202ENST00000398153 EFHBQ8N7U6 833 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 CEP120Q8N960 986 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 DDX27Q96GQ7 796 aaKnown RBP15.58■□□□□ 0.08
HDDC2-202ENST00000398153 MSTO1Q9BUK6 570 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 UBE2ZQ9H832 354 aaPredicted RBP15.58■□□□□ 0.08
HDDC2-202ENST00000398153 SERTAD1Q9UHV2 236 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 ADAM28Q9UKQ2 775 aa15.58■□□□□ 0.08
HDDC2-202ENST00000398153 TMEM189-UBE2V1I3L0A0 370 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 FAM189A1O60320 539 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 LDHAP00338 332 aaKnown RBP15.57■□□□□ 0.08
HDDC2-202ENST00000398153 C1RP00736 705 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 SRGAP2BP0DMP2 458 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 GARTP22102 1010 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 RPL9P32969 192 aaKnown RBP15.57■□□□□ 0.08
HDDC2-202ENST00000398153 NDUFA8P51970 172 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 OSTNP61366 133 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 SNRPFP62306 86 aaKnown RBP15.57■□□□□ 0.08
HDDC2-202ENST00000398153 ADAM15Q13444 863 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 DUSP6Q16828 381 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 SLC10A6Q3KNW5 377 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 SLC39A4Q6P5W5 647 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 DCLRE1AQ6PJP8 1040 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 TMEM184AQ6ZMB5 413 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 SYCP3Q8IZU3 236 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 FSIP1Q8NA03 581 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 PAGE5Q96GU1 130 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 ASB2Q96Q27 587 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 HAPLN2Q9GZV7 340 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 MARCH5Q9NX47 278 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 CHMP5Q9NZZ3 219 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 TBC1D7Q9P0N9 293 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 PRG3Q9Y2Y8 225 aaPredicted RBP15.57■□□□□ 0.08
HDDC2-202ENST00000398153 UBE4BO95155 1302 aa15.57■□□□□ 0.08
HDDC2-202ENST00000398153 UNC80Q8N2C7 3258 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 TTC26A0AVF1 554 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 C2orf71A6NGG8 1288 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 XPOTO43592 962 aaKnown RBP15.56■□□□□ 0.08
HDDC2-202ENST00000398153 TADA2AO75478 443 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 CXCL14O95715 111 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 HARSP12081 509 aaKnown RBP15.56■□□□□ 0.08
HDDC2-202ENST00000398153 CYP3A5P20815 502 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 AFMP43652 599 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 NRIP1P48552 1158 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 PPP2R3AQ06190 1150 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 USP41Q3LFD5 358 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 LEXMQ3ZCV2 418 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 TJAP1Q5JTD0 557 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 PLPP4Q5VZY2 271 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 PPFIBP1Q86W92 1011 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 ZNF507Q8TCN5 953 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 BCL7CQ8WUZ0 217 aaPredicted RBP15.56■□□□□ 0.08
HDDC2-202ENST00000398153 POMGNT1Q8WZA1 660 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 HERC2P3Q9BVR0 1158 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 ASB7Q9H672 318 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 RPF1Q9H9Y2 349 aaKnown RBP15.56■□□□□ 0.08
HDDC2-202ENST00000398153 GDPD2Q9HCC8 539 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 MRPL17Q9NRX2 175 aaKnown RBP15.56■□□□□ 0.08
HDDC2-202ENST00000398153 CHST7Q9NS84 486 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 CGNQ9P2M7 1197 aaKnown RBP15.56■□□□□ 0.08
HDDC2-202ENST00000398153 CPSF3Q9UKF6 684 aaKnown RBP15.56■□□□□ 0.08
HDDC2-202ENST00000398153 AGO2Q9UKV8 859 aaKnown RBP15.56■□□□□ 0.08
HDDC2-202ENST00000398153 DERAQ9Y315 318 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 SF3B1O75533 1304 aaKnown RBP eCLIP15.56■□□□□ 0.081e-13■■■■■ 310.2
HDDC2-202ENST00000398153 TRIP11Q15643 1979 aa15.56■□□□□ 0.08
HDDC2-202ENST00000398153 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 TRAPPC3O43617 180 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 ZNF202O95125 648 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 URODP06132 367 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 MYBP10242 640 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 PAX3P23760 479 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 CASP5P51878 434 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 CREMQ03060 361 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 CUL4BQ13620 913 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 UPP1Q16831 310 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 FUT10Q6P4F1 479 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 PDXDC1Q6P996 788 aa15.55■□□□□ 0.08
HDDC2-202ENST00000398153 KRBA2Q6ZNG9 492 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms