RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 CRELD2Q6UXH1 353 aaPredicted RBP27.64■■■□□ 2.02
TMEM55B-202ENST00000398020 ALKAL1Q6UXT8 129 aa27.64■■■□□ 2.02
TMEM55B-202ENST00000398020 HS2ST1Q7LGA3 356 aa27.64■■■□□ 2.02
TMEM55B-202ENST00000398020 GDPD5Q8WTR4 605 aa27.64■■■□□ 2.02
TMEM55B-202ENST00000398020 FAM212AQ96EL1 285 aa27.64■■■□□ 2.02
TMEM55B-202ENST00000398020 KIAA1468Q9P260 1216 aa27.64■■■□□ 2.02
TMEM55B-202ENST00000398020 CACNG4Q9UBN1 327 aa27.64■■■□□ 2.02
TMEM55B-202ENST00000398020 LAG3P18627 525 aa27.63■■■□□ 2.01
TMEM55B-202ENST00000398020 BCAR1P56945 870 aa27.63■■■□□ 2.01
TMEM55B-202ENST00000398020 SPAG1Q07617 926 aa27.63■■■□□ 2.01
TMEM55B-202ENST00000398020 GRIK3Q13003 919 aa27.63■■■□□ 2.01
TMEM55B-202ENST00000398020 KCNT2Q6UVM3 1135 aa27.63■■■□□ 2.01
TMEM55B-202ENST00000398020 ZMAT2Q96NC0 199 aaKnown RBP27.63■■■□□ 2.01
TMEM55B-202ENST00000398020 RPF1Q9H9Y2 349 aaKnown RBP27.63■■■□□ 2.01
TMEM55B-202ENST00000398020 RWDD3Q9Y3V2 267 aa27.63■■■□□ 2.01
TMEM55B-202ENST00000398020 SMIM28A0A1B0GU29 152 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 THP07101 528 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 BMP6P22004 513 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 PRCPP42785 496 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 CYP2J2P51589 502 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 KYAT1Q16773 422 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 GUF1Q8N442 669 aaKnown RBP27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 RABGGTAQ92696 567 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 ZNF558Q96NG5 402 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 SAMD11Q96NU1 681 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 AAASQ9NRG9 546 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 HSPBP1Q9NZL4 362 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 PCDHB12Q9Y5F1 795 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 KIF20AO95235 890 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 XKR4Q5GH76 650 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 KLHL23Q8NBE8 558 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 CNTN3Q9P232 1028 aa27.62■■■□□ 2.01
TMEM55B-202ENST00000398020 TTC26A0AVF1 554 aa27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 LACTBL1A8MY62 500 aa27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 SLC11A1P49279 550 aa27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 ALDH7A1P49419 539 aaKnown RBP27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 PPP2R3AQ06190 1150 aa27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 DSC1Q08554 894 aa27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 COLGALT2Q8IYK4 626 aa27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 PPP1R10Q96QC0 940 aaKnown RBP27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 ALG13Q9NP73 1137 aaKnown RBP27.61■■■□□ 2.01
TMEM55B-202ENST00000398020 COL4A4P53420 1690 aaPredicted RBP27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 C5orf67F2Z3F1 127 aa27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 MBD3O95983 291 aa27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 GALTP07902 379 aa27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 OR1G1P47890 313 aa27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 MORC3Q14149 939 aa27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 NAB2Q15742 525 aa27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 TMEM173Q86WV6 379 aaPredicted RBP27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 GPD1LQ8N335 351 aa27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 GOLGA2P5Q9HBQ8 144 aa27.6■■■□□ 2.01
TMEM55B-202ENST00000398020 CASTOR2A6NHX0 329 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 PDXKO00764 312 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 EXTL3O43909 919 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 CSPG5O95196 566 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 LDHAP00338 332 aaKnown RBP27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 GPM6BQ13491 265 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 RDH13Q8NBN7 331 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 PAAF1Q9BRP4 392 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 PRG3Q9Y2Y8 225 aaPredicted RBP27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 F8W810 466 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 KCNE1P15382 129 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 SNRPFP62306 86 aaKnown RBP27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 TUSC3Q13454 348 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 CBWD2Q8IUF1 395 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 TMEM130Q8N3G9 435 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 GOLGA5Q8TBA6 731 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 C18orf25Q96B23 403 aaPredicted RBP27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 GUCD1Q96NT3 240 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 C11orf84Q9BUA3 381 aaPredicted RBP27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 PLVAPQ9BX97 442 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 PLEKHA5Q9HAU0 1116 aa27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 RBAKQ9NYW8 714 aaPredicted RBP27.59■■■□□ 2.01
TMEM55B-202ENST00000398020 H3BNC9 293 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 NRP1O14786 923 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 FGF18O76093 207 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 ITGB1P05556 798 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 RB1P06400 928 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 CD44P16070 742 aaKnown RBP27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 WNT7BP56706 349 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 SOX4Q06945 474 aaPredicted RBP27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 ADSSL1Q8N142 457 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 BCL7CQ8WUZ0 217 aaPredicted RBP27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 KIF12Q96FN5 646 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 CDX2Q99626 313 aaPredicted RBP27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 MTMR10Q9NXD2 777 aa27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 CGNQ9P2M7 1197 aaKnown RBP27.58■■■□□ 2.01
TMEM55B-202ENST00000398020 EYSQ5T1H1 3165 aa27.58■■■□□ 2
TMEM55B-202ENST00000398020 ANK1P16157 1881 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 PDCD11Q14690 1871 aaKnown RBP27.57■■■□□ 2
TMEM55B-202ENST00000398020 PLXNA4Q9HCM2 1894 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 ALDH2P05091 517 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 JADE1Q6IE81 842 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 SLC39A11Q8N1S5 342 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 XXYLT1Q8NBI6 393 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 MYLIPQ8WY64 445 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 P2RX5Q93086 422 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 TMEM175Q9BSA9 504 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 SPG21Q9NZD8 308 aa27.57■■■□□ 2
TMEM55B-202ENST00000398020 TRAF3IP3Q9Y228 551 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms