RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 VARS2Q5ST30 1063 aaKnown RBP17.85■□□□□ 0.45
CUX2-202ENST00000397643 LIN9Q5TKA1 542 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 FAM171A1Q5VUB5 890 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 PIK3AP1Q6ZUJ8 805 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 TPH2Q8IWU9 490 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 NPAS3Q8IXF0 933 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 ZBTB44Q8NCP5 570 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 EIF2AK1Q9BQI3 630 aaKnown RBP17.85■□□□□ 0.45
CUX2-202ENST00000397643 PARP2Q9UGN5 583 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 PCDHGA2Q9Y5H1 932 aa17.85■□□□□ 0.45
CUX2-202ENST00000397643 SHISA7A6NL88 538 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 FAM170BA6NMN3 283 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 CD72P21854 359 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 RBM25P49756 843 aaKnown RBP17.84■□□□□ 0.45
CUX2-202ENST00000397643 RARRES1P49788 294 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 STK3Q13188 491 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 POTEHQ6S545 545 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 RSPO2Q6UXX9 243 aaPredicted RBP17.84■□□□□ 0.45
CUX2-202ENST00000397643 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 SLFN12Q8IYM2 578 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 SLC7A14Q8TBB6 771 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 CLDN23Q96B33 292 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 BORCS6Q96GS4 357 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 CNTNAP3BQ96NU0 1288 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 KXD1Q9BQD3 176 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 CNTNAP3Q9BZ76 1288 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 POLR3FQ9H1D9 316 aaPredicted RBP17.84■□□□□ 0.45
CUX2-202ENST00000397643 ANKEF1Q9NU02 776 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 HCFC1R1Q9NWW0 138 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 ZFHX4Q86UP3 3567 aa17.84■□□□□ 0.45
CUX2-202ENST00000397643 TTLL13PA6NNM8 815 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 DTNBO60941 627 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 LILRB5O75023 590 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 TARSP26639 723 aaKnown RBP17.83■□□□□ 0.44
CUX2-202ENST00000397643 CSTF1Q05048 431 aaKnown RBP17.83■□□□□ 0.44
CUX2-202ENST00000397643 CEP57Q86XR8 500 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 TBC1D32Q96NH3 1257 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 NAP1L4Q99733 375 aaKnown RBP17.83■□□□□ 0.44
CUX2-202ENST00000397643 TM6SF1Q9BZW5 370 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 EPC1Q9H2F5 836 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 NCDNQ9UBB6 729 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 DNMT3BQ9UBC3 853 aaKnown RBP17.83■□□□□ 0.44
CUX2-202ENST00000397643 F5P12259 2224 aa17.83■□□□□ 0.44
CUX2-202ENST00000397643 STK36Q9NRP7 1315 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 XYLBO75191 536 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 TGM1P22735 817 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 IGFBP6P24592 240 aaPredicted RBP17.82■□□□□ 0.44
CUX2-202ENST00000397643 MAGEA9P43362 315 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 PFKPQ01813 784 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 SCRN1Q12765 414 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 FZD5Q13467 585 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 RAB33AQ14088 237 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 CDCA2Q69YH5 1023 aaPredicted RBP17.82■□□□□ 0.44
CUX2-202ENST00000397643 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
CUX2-202ENST00000397643 TNFRSF25Q93038 417 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 PRIMPOLQ96LW4 560 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 FZD8Q9H461 694 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 PDZD7Q9H5P4 517 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 GPRC5CQ9NQ84 441 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 PRMT8Q9NR22 394 aaPredicted RBP17.82■□□□□ 0.44
CUX2-202ENST00000397643 KCNH3Q9ULD8 1083 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
CUX2-202ENST00000397643 SMG5Q9UPR3 1016 aaKnown RBP17.82■□□□□ 0.44
CUX2-202ENST00000397643 MARCH6O60337 910 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 RECQL4O94761 1208 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 ATXN1P54253 815 aaKnown RBP17.81■□□□□ 0.44
CUX2-202ENST00000397643 FAM187BQ17R55 369 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 SLC5A9Q2M3M2 681 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 PABPC1LQ4VXU2 614 aaKnown RBP17.81■□□□□ 0.44
CUX2-202ENST00000397643 AXDND1Q5T1B0 1012 aaPredicted RBP17.81■□□□□ 0.44
CUX2-202ENST00000397643 TPRG1Q6ZUI0 275 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 PIGOQ8TEQ8 1089 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 ING5Q8WYH8 240 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 PLA2G2FQ9BZM2 168 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 PRMT7Q9NVM4 692 aaPredicted RBP17.81■□□□□ 0.44
CUX2-202ENST00000397643 ZSCAN32Q9NX65 697 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 SNTG2Q9NY99 539 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 MTRRQ9UBK8 725 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 CYP46A1Q9Y6A2 500 aa17.81■□□□□ 0.44
CUX2-202ENST00000397643 A0A087WWV3 80 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 USO1O60763 962 aaKnown RBP17.8■□□□□ 0.44
CUX2-202ENST00000397643 KRT37O76014 449 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 EDN1P05305 212 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 THP07101 528 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 FGFR3P22607 806 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 OR1D2P34982 312 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 RPS9P46781 194 aaKnown RBP17.8■□□□□ 0.44
CUX2-202ENST00000397643 ELAVL2Q12926 359 aaKnown RBP17.8■□□□□ 0.44
CUX2-202ENST00000397643 NR5A1Q13285 461 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 ZBTB41Q5SVQ8 909 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 TSSK4Q6SA08 328 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 CD300LGQ6UXG3 332 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.8■□□□□ 0.44
CUX2-202ENST00000397643 ZNF687Q8N1G0 1237 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 ATRIPQ8WXE1 791 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 MAP1BP46821 2468 aaKnown RBP17.8■□□□□ 0.44
CUX2-202ENST00000397643 COL4A2P08572 1712 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 CHD8Q9HCK8 2581 aa17.8■□□□□ 0.44
CUX2-202ENST00000397643 LRRIQ4A6NIV6 560 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms