RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GRM5P41594 1212 aa29.79■■■□□ 2.36
CPNE1-203ENST00000397442 LPIN1Q14693 890 aa29.79■■■□□ 2.36
CPNE1-203ENST00000397442 DIS3LQ8TF46 1054 aaKnown RBP29.79■■■□□ 2.36
CPNE1-203ENST00000397442 RPF1Q9H9Y2 349 aaKnown RBP29.79■■■□□ 2.36
CPNE1-203ENST00000397442 TNNI1P19237 187 aa29.79■■■□□ 2.36
CPNE1-203ENST00000397442 SLC39A5Q6ZMH5 540 aa29.79■■■□□ 2.36
CPNE1-203ENST00000397442 CNGA4Q8IV77 575 aa29.79■■■□□ 2.36
CPNE1-203ENST00000397442 LRRN2O75325 713 aa29.78■■■□□ 2.36
CPNE1-203ENST00000397442 C4BPAP04003 597 aaKnown RBP29.78■■■□□ 2.36
CPNE1-203ENST00000397442 TPM1P09493 284 aa29.78■■■□□ 2.36
CPNE1-203ENST00000397442 GHRP10912 638 aa29.78■■■□□ 2.36
CPNE1-203ENST00000397442 SLC10A6Q3KNW5 377 aa29.78■■■□□ 2.36
CPNE1-203ENST00000397442 KLHDC7AQ5VTJ3 777 aa29.78■■■□□ 2.36
CPNE1-203ENST00000397442 APBB1IPQ7Z5R6 666 aaPredicted RBP29.78■■■□□ 2.36
CPNE1-203ENST00000397442 EHBP1Q8NDI1 1231 aa29.78■■■□□ 2.36
CPNE1-203ENST00000397442 CCDC51Q96ER9 411 aa29.78■■■□□ 2.36
CPNE1-203ENST00000397442 INTS2Q9H0H0 1204 aaKnown RBP29.78■■■□□ 2.36
CPNE1-203ENST00000397442 ERVK-5Q9HDB9 667 aa29.78■■■□□ 2.36
CPNE1-203ENST00000397442 LUC7L2Q9Y383 392 aaKnown RBP29.78■■■□□ 2.36
CPNE1-203ENST00000397442 KRT9P35527 623 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 CCZ1BP86790 482 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 CCZ1P86791 482 aaPredicted RBP29.77■■■□□ 2.36
CPNE1-203ENST00000397442 SURF1Q15526 300 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 ZACNQ401N2 412 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 WDR49Q8IV35 697 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 OR5B17Q8NGF7 314 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 BAP1Q92560 729 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 SEMA4DQ92854 862 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 FAM212AQ96EL1 285 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 EDEM3Q9BZQ6 932 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 TMX1Q9H3N1 280 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 PADI3Q9ULW8 664 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 SQORQ9Y6N5 450 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 MROH7Q68CQ1 1323 aa29.77■■■□□ 2.36
CPNE1-203ENST00000397442 GPR182O15218 404 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 CD52P31358 61 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 ATN1P54259 1190 aaPredicted RBP29.76■■■□□ 2.36
CPNE1-203ENST00000397442 NFX1Q12986 1120 aaKnown RBP29.76■■■□□ 2.36
CPNE1-203ENST00000397442 MBTPS1Q14703 1052 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 TDRD10Q5VZ19 366 aaKnown RBP29.76■■■□□ 2.36
CPNE1-203ENST00000397442 ANKRD33Q7Z3H0 272 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 CAGE1Q8TC20 777 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 TAS1R2Q8TE23 839 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 PANX2Q96RD6 677 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 DNAJC7Q99615 494 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 ABHD10Q9NUJ1 306 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 CEP72Q9P209 647 aa29.76■■■□□ 2.36
CPNE1-203ENST00000397442 CITO14578 2027 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 IL18RAPO95256 599 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 ZBED6P86452 979 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 CETN1Q12798 172 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 TMEM139Q8IV31 216 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 EFCAB13Q8IY85 973 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 ANKLE1Q8NAG6 615 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 ACAP3Q96P50 834 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 NXF3Q9H4D5 531 aaKnown RBP29.76■■■□□ 2.35
CPNE1-203ENST00000397442 CHST12Q9NRB3 414 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 HES2Q9Y543 173 aa29.76■■■□□ 2.35
CPNE1-203ENST00000397442 LACTBL1A8MY62 500 aa29.75■■■□□ 2.35
CPNE1-203ENST00000397442 UCHL3P15374 230 aa29.75■■■□□ 2.35
CPNE1-203ENST00000397442 POLR2FP61218 127 aaKnown RBP29.75■■■□□ 2.35
CPNE1-203ENST00000397442 FBXL13Q8NEE6 735 aa29.75■■■□□ 2.35
CPNE1-203ENST00000397442 SNTG2Q9NY99 539 aa29.75■■■□□ 2.35
CPNE1-203ENST00000397442 FBXL5Q9UKA1 691 aa29.75■■■□□ 2.35
CPNE1-203ENST00000397442 KIAA0100Q14667 2235 aaKnown RBP29.74■■■□□ 2.35
CPNE1-203ENST00000397442 PQBP1O60828 265 aaKnown RBP29.74■■■□□ 2.35
CPNE1-203ENST00000397442 C1orf53Q5VUE5 145 aa29.74■■■□□ 2.35
CPNE1-203ENST00000397442 USP38Q8NB14 1042 aa29.74■■■□□ 2.35
CPNE1-203ENST00000397442 CCDC94Q9BW85 323 aaPredicted RBP29.74■■■□□ 2.35
CPNE1-203ENST00000397442 PRDM10Q9NQV6 1147 aa29.74■■■□□ 2.35
CPNE1-203ENST00000397442 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.74■■■□□ 2.35
CPNE1-203ENST00000397442 AJAP1Q9UKB5 411 aaPredicted RBP29.74■■■□□ 2.35
CPNE1-203ENST00000397442 FHOD1Q9Y613 1164 aa29.74■■■□□ 2.35
CPNE1-203ENST00000397442 VNN1O95497 513 aa29.73■■■□□ 2.35
CPNE1-203ENST00000397442 PAK2Q13177 524 aa29.73■■■□□ 2.35
CPNE1-203ENST00000397442 GJB7Q6PEY0 223 aa29.73■■■□□ 2.35
CPNE1-203ENST00000397442 SMG8Q8ND04 991 aaKnown RBP29.73■■■□□ 2.35
CPNE1-203ENST00000397442 OR8K1Q8NGG5 319 aa29.73■■■□□ 2.35
CPNE1-203ENST00000397442 NAA15Q9BXJ9 866 aaKnown RBP29.73■■■□□ 2.35
CPNE1-203ENST00000397442 TRIM6Q9C030 488 aaPredicted RBP29.73■■■□□ 2.35
CPNE1-203ENST00000397442 ASB7Q9H672 318 aa29.73■■■□□ 2.35
CPNE1-203ENST00000397442 NLRC4Q9NPP4 1024 aa29.73■■■□□ 2.35
CPNE1-203ENST00000397442 RAB20Q9NX57 234 aa29.73■■■□□ 2.35
CPNE1-203ENST00000397442 RALGAPA2Q2PPJ7 1873 aa29.73■■■□□ 2.35
CPNE1-203ENST00000397442 FECHP22830 423 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 AP3M2P53677 418 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 TWF2Q6IBS0 349 aaKnown RBP29.72■■■□□ 2.35
CPNE1-203ENST00000397442 PHLDB3Q6NSJ2 640 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 MTMR12Q9C0I1 747 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 APEX2Q9UBZ4 518 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 TRIP11Q15643 1979 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 NFICP08651 508 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 SELPP16109 830 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 DSC3Q14574 896 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 SCARA3Q6AZY7 606 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 CXCL16Q9H2A7 254 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 IPPQ9Y573 584 aa29.72■■■□□ 2.35
CPNE1-203ENST00000397442 MGEA5O60502 916 aa29.71■■■□□ 2.35
CPNE1-203ENST00000397442 BFSP2Q13515 415 aa29.71■■■□□ 2.35
CPNE1-203ENST00000397442 DUOXA2Q1HG44 320 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms