RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
SYNE4-203ENST00000397428 PSMD5Q16401 504 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 MAPK6Q16659 721 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 PDXDC1Q6P996 788 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 CD300LGQ6UXG3 332 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 CEP57Q86XR8 500 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 NOSTRINQ8IVI9 506 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 C1orf210Q8IVY1 113 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 ZBTB8OSQ8IWT0 167 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 BSNDQ8WZ55 320 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 FGF13Q92913 245 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 SHDQ96IW2 340 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 CCDC43Q96MW1 224 aaKnown RBP13.18□□□□□ -0.3
SYNE4-203ENST00000397428 DDX23Q9BUQ8 820 aaKnown RBP13.18□□□□□ -0.3
SYNE4-203ENST00000397428 RIF1Q5UIP0 2472 aaKnown RBP13.18□□□□□ -0.3
SYNE4-203ENST00000397428 DCHS1Q96JQ0 3298 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 DMXL1Q9Y485 3027 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 RECQL4O94761 1208 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 NAMPTP43490 491 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 RBM25P49756 843 aaKnown RBP13.17□□□□□ -0.3
SYNE4-203ENST00000397428 PPM1LQ5SGD2 360 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 AXDND1Q5T1B0 1012 aaPredicted RBP13.17□□□□□ -0.3
SYNE4-203ENST00000397428 EEF1DP3Q658K8 133 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 MAML2Q8IZL2 1156 aaPredicted RBP13.17□□□□□ -0.3
SYNE4-203ENST00000397428 ST13P5Q8NFI4 369 aaPredicted RBP13.17□□□□□ -0.3
SYNE4-203ENST00000397428 PJA1Q8NG27 643 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 HASPINQ8TF76 798 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 BORCS6Q96GS4 357 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 USP20Q9Y2K6 914 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 R4GN57 208 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 DOCK6Q96HP0 2047 aa13.17□□□□□ -0.3
SYNE4-203ENST00000397428 TMEM189-UBE2V1I3L0A0 370 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 JAK2O60674 1132 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 EDN1P05305 212 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 C8AP07357 584 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 MUTP22033 750 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 RFX1P22670 979 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 MCM7P33993 719 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 OR1D2P34982 312 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 EFNA5P52803 228 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 TRIM29Q14134 588 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 SLC44A4Q53GD3 710 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 SPECC1Q5M775 1068 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 NT5DC1Q5TFE4 455 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 LIN9Q5TKA1 542 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 RSPO2Q6UXX9 243 aaPredicted RBP13.16□□□□□ -0.3
SYNE4-203ENST00000397428 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
SYNE4-203ENST00000397428 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 PPP1R10Q96QC0 940 aaKnown RBP13.16□□□□□ -0.3
SYNE4-203ENST00000397428 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 OSBPL6Q9BZF3 934 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 FOXQ1Q9C009 403 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 DNMT3BQ9UBC3 853 aaKnown RBP13.16□□□□□ -0.3
SYNE4-203ENST00000397428 BACE2Q9Y5Z0 518 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
SYNE4-203ENST00000397428 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 KANSL1LA0AUZ9 987 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 CCL16O15467 120 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 XYLBO75191 536 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 LRRN2O75325 713 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 PRKCBP05771 671 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 PRKCQQ04759 706 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 SNW1Q13573 536 aaKnown RBP13.15□□□□□ -0.3
SYNE4-203ENST00000397428 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 UPP1Q16831 310 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 XKR4Q5GH76 650 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 ALKAL1Q6UXT8 129 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 DEPTORQ8TB45 409 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 AVENQ9NQS1 362 aaPredicted RBP13.15□□□□□ -0.3
SYNE4-203ENST00000397428 HCFC1R1Q9NWW0 138 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 MTRRQ9UBK8 725 aa13.15□□□□□ -0.3
SYNE4-203ENST00000397428 MTF2Q9Y483 593 aaPredicted RBP13.15□□□□□ -0.3
SYNE4-203ENST00000397428 ARHGEF35A5YM69 484 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 B3GAT3O94766 335 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 CLCNKBP51801 687 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 NEK4P51957 841 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 ORC2Q13416 577 aaPredicted RBP13.14□□□□□ -0.31
SYNE4-203ENST00000397428 ZNF174Q15697 407 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 ZNF528Q3MIS6 628 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 DCAF4L1Q3SXM0 396 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 ZC3H14Q6PJT7 736 aaKnown RBP13.14□□□□□ -0.31
SYNE4-203ENST00000397428 POTEHQ6S545 545 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 SUMF1Q8NBK3 374 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 UROC1Q96N76 676 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 NELL2Q99435 816 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 POLD4Q9HCU8 107 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 PTPRHQ9HD43 1115 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 GDAQ9Y2T3 454 aa13.14□□□□□ -0.31
SYNE4-203ENST00000397428 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
SYNE4-203ENST00000397428 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms