RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 NR3C1P04150 777 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 RPL13P26373 211 aaKnown RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 CYP2C18P33260 490 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 CCL23P55773 120 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 KRT83P78385 493 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 MBTPS1Q14703 1052 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 NOTUMQ6P988 496 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 POMGNT1Q8WZA1 660 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 TCHPQ9BT92 498 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 OSBPL7Q9BZF2 842 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 PDZD7Q9H5P4 517 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 HAUS4Q9H6D7 363 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 AGO3Q9H9G7 860 aaKnown RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 NHEJ1Q9H9Q4 299 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 ERVK-5Q9HDB9 667 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 CEP72Q9P209 647 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 PADI3Q9ULW8 664 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 PIN4Q9Y237 131 aaKnown RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 TRIM43BA6NCK2 446 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 CLDN3O15551 220 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 TADA3O75528 432 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 RAG1P15918 1043 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 GARTP22102 1010 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 TUBB2AQ13885 445 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 NAA30Q147X3 362 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 ZNF568Q3ZCX4 644 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 PDXDC1Q6P996 788 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 MPZL3Q6UWV2 235 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 C12orf56Q8IXR9 622 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 LRRN4CLQ8ND94 238 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 NEK11Q8NG66 645 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 SYN2Q92777 582 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 TRIM43Q96BQ3 446 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 SCLYQ96I15 445 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 ZBTB45Q96K62 511 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 CBWD1Q9BRT8 395 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 TUBB2BQ9BVA1 445 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 WNT8AQ9H1J5 351 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 PCIF1Q9H4Z3 704 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 FAM207AQ9NSI2 230 aaPredicted RBP16.16■□□□□ 0.18
CAPN3-207ENST00000397200 PRKAG2Q9UGJ0 569 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 STYXL1Q9Y6J8 313 aa16.16■□□□□ 0.18
CAPN3-207ENST00000397200 SCN5AQ14524 2016 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 A0A1B0GUA9 196 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 NBNO60934 754 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 NOL4O94818 638 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 TIMP1P01033 207 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 HARSP12081 509 aaKnown RBP16.15■□□□□ 0.18
CAPN3-207ENST00000397200 PROZP22891 400 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 ADSSP30520 456 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 HOXA11P31270 313 aaPredicted RBP16.15■□□□□ 0.18
CAPN3-207ENST00000397200 CYP2J2P51589 502 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 EEF1DP3Q658K8 133 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 APBB1IPQ7Z5R6 666 aaPredicted RBP16.15■□□□□ 0.18
CAPN3-207ENST00000397200 ZBTB33Q86T24 672 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 CDR2LQ86X02 465 aaPredicted RBP16.15■□□□□ 0.18
CAPN3-207ENST00000397200 MSTO1Q9BUK6 570 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 IFIH1Q9BYX4 1025 aaKnown RBP16.15■□□□□ 0.18
CAPN3-207ENST00000397200 NUCKS1Q9H1E3 243 aaKnown RBP16.15■□□□□ 0.18
CAPN3-207ENST00000397200 MMRN2Q9H8L6 949 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 METTL14Q9HCE5 456 aaKnown RBP16.15■□□□□ 0.18
CAPN3-207ENST00000397200 PTPRHQ9HD43 1115 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 CHST12Q9NRB3 414 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 HSPBP1Q9NZL4 362 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 ARHGAP20Q9P2F6 1191 aa16.15■□□□□ 0.18
CAPN3-207ENST00000397200 KIAA0391O15091 583 aaKnown RBP16.14■□□□□ 0.17
CAPN3-207ENST00000397200 ABL1P00519 1130 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
CAPN3-207ENST00000397200 MCL1Q07820 350 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
CAPN3-207ENST00000397200 MYBPC2Q14324 1141 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 DPY19L2P1Q6NXN4 242 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 SLC27A1Q6PCB7 646 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 SLC9A9Q8IVB4 645 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 C7orf61Q8IZ16 206 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 XXYLT1Q8NBI6 393 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 TMEM174Q8WUU8 243 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 BORCS6Q96GS4 357 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 MKNK1Q9BUB5 465 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 GANQ9H2C0 597 aa16.14■□□□□ 0.17
CAPN3-207ENST00000397200 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.17
CAPN3-207ENST00000397200 AGO2Q9UKV8 859 aaKnown RBP16.14■□□□□ 0.17
CAPN3-207ENST00000397200 A0A0B4J269 797 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 SSU72P8A0A1W2PR75 194 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 LRRC53A6NM62 1247 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 EFCAB8A8MWE9 144 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 ABLIM1O14639 778 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 EXOC3O60645 756 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 MCF2P10911 925 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 RFC2P35250 354 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 ELF2Q15723 593 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 DCAF4L1Q3SXM0 396 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 ZNF569Q5MCW4 686 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 TWF2Q6IBS0 349 aaKnown RBP16.13■□□□□ 0.17
CAPN3-207ENST00000397200 SLC35F6Q8N357 371 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 SEPT8Q92599 483 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 HAPLN2Q9GZV7 340 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 CDT1Q9H211 546 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms