RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PTPN14Q15678 1187 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 TPRNQ4KMQ1 711 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 L1TD1Q5T7N2 865 aaKnown RBP15.93■□□□□ 0.14
SEC13-208ENST00000397109 ANKRD54Q6NXT1 300 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 ZBTB33Q86T24 672 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 RNF168Q8IYW5 571 aaPredicted RBP15.93■□□□□ 0.14
SEC13-208ENST00000397109 AUTS2Q8WXX7 1259 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 BICD1Q96G01 975 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 ACAP3Q96P50 834 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 SEL1LQ9UBV2 794 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 ADAM28Q9UKQ2 775 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 HCFC2Q9Y5Z7 792 aa15.93■□□□□ 0.14
SEC13-208ENST00000397109 K7ENM7 598 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 ABLIM1O14639 778 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 LILRB3O75022 631 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 EFEMP2O95967 443 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 MCL1Q07820 350 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 XKR4Q5GH76 650 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 KIAA1841Q6NSI8 718 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 LLGL2Q6P1M3 1020 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 FUT10Q6P4F1 479 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 ADHFE1Q8IWW8 467 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 LEO1Q8WVC0 666 aaPredicted RBP15.92■□□□□ 0.14
SEC13-208ENST00000397109 DDX12PQ92771 950 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 CHAMP1Q96JM3 812 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 ZBTB45Q96K62 511 aaPredicted RBP15.92■□□□□ 0.14
SEC13-208ENST00000397109 POP1Q99575 1024 aaKnown RBP15.92■□□□□ 0.14
SEC13-208ENST00000397109 ANKFY1Q9P2R3 1169 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 TBX20Q9UMR3 447 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 TRIP11Q15643 1979 aa15.92■□□□□ 0.14
SEC13-208ENST00000397109 CITO14578 2027 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 PIGRP01833 764 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 GAP43P17677 238 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 MATR3P43243 847 aaKnown RBP eCLIP15.91■□□□□ 0.14
SEC13-208ENST00000397109 GLUD2P49448 558 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 LIG4P49917 911 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 RBM10P98175 930 aaKnown RBP15.91■□□□□ 0.14
SEC13-208ENST00000397109 DSG1Q02413 1049 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 NAB2Q15742 525 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 KYAT1Q16773 422 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 USP41Q3LFD5 358 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 ALKAL1Q6UXT8 129 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 DYMQ7RTS9 669 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 GJD3Q8N144 294 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 CEP120Q8N960 986 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 UROC1Q96N76 676 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 KLHL5Q96PQ7 755 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 PPP1R10Q96QC0 940 aaKnown RBP15.91■□□□□ 0.14
SEC13-208ENST00000397109 PANK2Q9BZ23 570 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 CUEDC2Q9H467 287 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 ST6GALNAC4Q9H4F1 302 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 CHST7Q9NS84 486 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 SLC38A7Q9NVC3 462 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 DZANK1Q9NVP4 752 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 SF3B1O75533 1304 aaKnown RBP eCLIP15.91■□□□□ 0.144e-7■■■■■ 63.1
SEC13-208ENST00000397109 SMIM28A0A1B0GU29 152 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 CASTOR2A6NHX0 329 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 MYMKA6NI61 221 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 HARSP12081 509 aaKnown RBP15.91■□□□□ 0.14
SEC13-208ENST00000397109 KLRC2P26717 231 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 OSTNP61366 133 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 GTF2BQ00403 316 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 ELAVL2Q12926 359 aaKnown RBP15.91■□□□□ 0.14
SEC13-208ENST00000397109 KIAA0319Q5VV43 1072 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 TAS1R1Q7RTX1 841 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 SLC22A17Q8WUG5 538 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 SYAP1Q96A49 352 aaPredicted RBP15.91■□□□□ 0.14
SEC13-208ENST00000397109 SNX27Q96L92 541 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 FIZ1Q96SL8 496 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 GPR62Q9BZJ7 368 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 LRRC27Q9C0I9 530 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 S1PR5Q9H228 398 aa15.91■□□□□ 0.14
SEC13-208ENST00000397109 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.91■□□□□ 0.145e-7■□□□□ 8.4
SEC13-208ENST00000397109 USP15Q9Y4E8 981 aaPredicted RBP15.91■□□□□ 0.14
SEC13-208ENST00000397109 F8W810 466 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 TMEM189-UBE2V1I3L0A0 370 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 C2CD2LO14523 706 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 HNRNPDLO14979 420 aaKnown RBP15.9■□□□□ 0.14
SEC13-208ENST00000397109 ADH1AP07327 375 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 CLTAP09496 248 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 CNPP09543 421 aaKnown RBP15.9■□□□□ 0.14
SEC13-208ENST00000397109 KCNE1P15382 129 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 SSTR3P32745 418 aaPredicted RBP15.9■□□□□ 0.14
SEC13-208ENST00000397109 CREMQ03060 361 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 ZP2Q05996 745 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 ITIH3Q06033 890 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 GLRA4Q5JXX5 417 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 AXDND1Q5T1B0 1012 aaPredicted RBP15.9■□□□□ 0.14
SEC13-208ENST00000397109 CES5AQ6NT32 575 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 SYCE2Q6PIF2 218 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 DCLRE1AQ6PJP8 1040 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 PDILTQ8N807 584 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 SUSD6Q92537 303 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 HVCN1Q96D96 273 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 DNAJC19Q96DA6 116 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 DDX27Q96GQ7 796 aaKnown RBP15.9■□□□□ 0.14
SEC13-208ENST00000397109 PAAF1Q9BRP4 392 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 CXCL16Q9H2A7 254 aa15.9■□□□□ 0.14
SEC13-208ENST00000397109 PLEKHA5Q9HAU0 1116 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms