RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 GPD1LQ8N335 351 aa16.1■□□□□ 0.17
TM9SF1-202ENST00000396854 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
TM9SF1-202ENST00000396854 GOLGA1Q92805 767 aa16.1■□□□□ 0.17
TM9SF1-202ENST00000396854 AGO3Q9H9G7 860 aaKnown RBP16.1■□□□□ 0.17
TM9SF1-202ENST00000396854 ERVK-5Q9HDB9 667 aa16.1■□□□□ 0.17
TM9SF1-202ENST00000396854 TAB2Q9NYJ8 693 aa16.1■□□□□ 0.17
TM9SF1-202ENST00000396854 AGO2Q9UKV8 859 aaKnown RBP16.1■□□□□ 0.17
TM9SF1-202ENST00000396854 CITO14578 2027 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 LGALS16A8MUM7 142 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 GPR182O15218 404 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 KIF5CO60282 957 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 FAM189A1O60320 539 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 LDHAP00338 332 aaKnown RBP16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 CLTBP09497 229 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 PSMC2P35998 433 aaKnown RBP16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 TUBB2AQ13885 445 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 MBTPS1Q14703 1052 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 TMTC1Q8IUR5 882 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 MSTO1Q9BUK6 570 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 TUBB2BQ9BVA1 445 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 CDT1Q9H211 546 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 KIAA1586Q9HCI6 787 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 ST3GAL5Q9UNP4 418 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 FRMD4BQ9Y2L6 1034 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 EXTL3O43909 919 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 MCF2P10911 925 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 GHRP10912 638 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 MATR3P43243 847 aaKnown RBP eCLIP16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 FRMD5Q7Z6J6 570 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 ZSWIM2Q8NEG5 633 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 BORCS6Q96GS4 357 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 ADPGKQ9BRR6 497 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 TCHPQ9BT92 498 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 OSBPL7Q9BZF2 842 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 HIPK3Q9H422 1215 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 LZTFL1Q9NQ48 299 aa16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 PIN4Q9Y237 131 aaKnown RBP16.09■□□□□ 0.17
TM9SF1-202ENST00000396854 OGTO15294 1046 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 MCCD1P59942 119 aaPredicted RBP16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 PAK2Q13177 524 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 DCAF4L1Q3SXM0 396 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 TEX35Q5T0J7 233 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 COL13A1Q5TAT6 717 aaPredicted RBP16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 CC2D1AQ6P1N0 951 aaPredicted RBP16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 CDR2LQ86X02 465 aaPredicted RBP16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 FAM186BQ8IYM0 893 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 SAAL1Q96ER3 474 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 IRX2Q9BZI1 471 aaPredicted RBP16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 CHST12Q9NRB3 414 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 ST7Q9NRC1 585 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 ABHD10Q9NUJ1 306 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 PADI3Q9ULW8 664 aa16.08■□□□□ 0.16
TM9SF1-202ENST00000396854 PARNO95453 639 aaKnown RBP16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 CD52P31358 61 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 SNRNP35Q16560 246 aaKnown RBP16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 SLC27A1Q6PCB7 646 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 CRELD2Q6UXH1 353 aaPredicted RBP16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 APBB1IPQ7Z5R6 666 aaPredicted RBP16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 ZBTB33Q86T24 672 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 VPS16Q9H269 839 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 ARMCX3Q9UH62 379 aaPredicted RBP16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 UMODL1Q5DID0 1318 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 PDCD11Q14690 1871 aaKnown RBP16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 GOLGA8IPA6NC78 632 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 GOLGA8JA6NMD2 632 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 ADRB2P07550 413 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 ENPEPQ07075 957 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 FAM43BQ6ZT52 329 aaPredicted RBP16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 CBWD2Q8IUF1 395 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 TRIM59Q8IWR1 403 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 FAM213AQ9BRX8 229 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 UBXN6Q9BZV1 441 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 WNT8AQ9H1J5 351 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 TMEM39AQ9NV64 488 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 CDC23Q9UJX2 597 aa16.07■□□□□ 0.16
TM9SF1-202ENST00000396854 A0A0U1RQJ8 604 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 A0A1W2PQC6 194 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 SEC31AO94979 1220 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 HARSP12081 509 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 POU5F1Q01860 360 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 NFX1Q12986 1120 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 GPNMBQ14956 572 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 KYAT1Q16773 422 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 INTS8Q75QN2 995 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 ATRIPQ8WXE1 791 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 ABHD8Q96I13 439 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 MFSD14AQ96MC6 490 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 TUBGCP2Q9BSJ2 902 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 PARD6BQ9BYG5 372 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 EPC1Q9H2F5 836 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 MYO1AQ9UBC5 1043 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 CPSF3Q9UKF6 684 aaKnown RBP16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 ZNF233A6NK53 670 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 KIAA0355O15063 1070 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 NBNO60934 754 aa16.06■□□□□ 0.16
TM9SF1-202ENST00000396854 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms