RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 FMNL3Q8IVF7 1028 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 ARFGAP2Q8N6H7 521 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 USP6NLQ92738 828 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 TSPAN18Q96SJ8 248 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 SELENOSQ9BQE4 189 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 SEPT9Q9UHD8 586 aaPredicted RBP11.05□□□□□ -0.64
TUBB-208ENST00000396389 ATP8A1Q9Y2Q0 1164 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 FRMPD4Q14CM0 1322 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 A0A0G2JMZ2 1700 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 A0A1W2PQJ5 194 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 GRID2IPA4D2P6 1211 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 LAD1O00515 517 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 SART1O43290 800 aaKnown RBP11.05□□□□□ -0.64
TUBB-208ENST00000396389 INHAP05111 366 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 ZNF865P0CJ78 1059 aaPredicted RBP11.05□□□□□ -0.64
TUBB-208ENST00000396389 DHX9Q08211 1270 aaKnown RBP11.05□□□□□ -0.64
TUBB-208ENST00000396389 MTA1Q13330 715 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 SNX1Q13596 522 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 BZW1Q7L1Q6 419 aaKnown RBP11.05□□□□□ -0.64
TUBB-208ENST00000396389 TLK2Q86UE8 772 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 CCDC63Q8NA47 563 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 VTI1AQ96AJ9 217 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 RSRC1Q96IZ7 334 aaKnown RBP11.05□□□□□ -0.64
TUBB-208ENST00000396389 KATNBL1Q9H079 304 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 CCT8L1PA6NM43 557 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 WDR64B1ANS9 1081 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 TTI1O43156 1089 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 ZNF862O60290 1169 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 AP1G2O75843 785 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 KRT18P05783 430 aaKnown RBP11.05□□□□□ -0.64
TUBB-208ENST00000396389 HNRNPH3P31942 346 aaKnown RBP11.05□□□□□ -0.64
TUBB-208ENST00000396389 SLC8A1P32418 973 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 PRPHP41219 470 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 MTERF2Q49AM1 385 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 MEI1Q5TIA1 1274 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 MFSD14CQ5VZR4 134 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 CCDC62Q6P9F0 684 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 MOXD1Q6UVY6 613 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 ZNF570Q96NI8 536 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 YIPF3Q9GZM5 350 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 ISCUQ9H1K1 167 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 GPRC5CQ9NQ84 441 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.64
TUBB-208ENST00000396389 TBC1D22BQ9NU19 505 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 ABCF3Q9NUQ8 709 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 GINS2Q9Y248 185 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 NR2E1Q9Y466 385 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 PCDHA10Q9Y5I2 948 aa11.05□□□□□ -0.64
TUBB-208ENST00000396389 TMCO5BA8MYB1 307 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 LCA5LO95447 670 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 SARNPP82979 210 aaKnown RBP11.04□□□□□ -0.64
TUBB-208ENST00000396389 IFFO1Q0D2I5 559 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 SLC9C1Q4G0N8 1177 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 CELF3Q5SZQ8 465 aaKnown RBP11.04□□□□□ -0.64
TUBB-208ENST00000396389 THEMIS2Q5TEJ8 643 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 LRRC34Q8IZ02 419 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 RUBCNQ92622 972 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 NAP1L4Q99733 375 aaKnown RBP11.04□□□□□ -0.64
TUBB-208ENST00000396389 TRIM51Q9BSJ1 452 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 GGA2Q9UJY4 613 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 TRIM33Q9UPN9 1127 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 STK38LQ9Y2H1 464 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 GSTTP1A0A1W2PQM5 241 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 RSPH10B2B2RC85 870 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 PJA2O43164 708 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 GJB1P08034 283 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 MYL3P08590 195 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 RSPH10BP0C881 870 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 CHN1P15882 459 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 RAPGEF1Q13905 1077 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 CXCL17Q6UXB2 119 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 CDHR1Q96JP9 859 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 RIT2Q99578 217 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 BLOC1S4Q9NUP1 217 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 DOCK5Q9H7D0 1870 aa11.04□□□□□ -0.64
TUBB-208ENST00000396389 BICDL2A1A5D9 508 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 GRK4P32298 578 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 SLCO1A2P46721 670 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 IFI35P80217 286 aaPredicted RBP11.03□□□□□ -0.64
TUBB-208ENST00000396389 ARHGAP1Q07960 439 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 GRIK3Q13003 919 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 PPP2R5CQ13362 524 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 NAB2Q15742 525 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 LACTB2Q53H82 288 aaPredicted RBP11.03□□□□□ -0.64
TUBB-208ENST00000396389 CCDC50Q8IVM0 306 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 CHMP6Q96FZ7 201 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 XPO6Q96QU8 1125 aaKnown RBP11.03□□□□□ -0.64
TUBB-208ENST00000396389 HSD17B14Q9BPX1 270 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 LCTP09848 1927 aa11.03□□□□□ -0.64
TUBB-208ENST00000396389 ZNFX1Q9P2E3 1918 aaKnown RBP11.03□□□□□ -0.64
TUBB-208ENST00000396389 CEP290O15078 2479 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms