RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 STX18Q9P2W9 335 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 KCNN4O15554 427 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 TLR2O60603 784 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ABCE1P61221 599 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF235Q14590 738 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CYFIP1Q7L576 1253 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 LDHDQ86WU2 507 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SPATA2LQ8IUW3 424 aaPredicted RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 ADGRG1Q9Y653 693 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 IQGAP1P46940 1657 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SMAPO00193 183 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 TPI1P60174 286 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 EIF3EP60228 445 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SLC44A5Q8NCS7 719 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 PPHLN1Q8NEY8 458 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 OR9Q1Q8NGQ5 310 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SMYD3Q9H7B4 428 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 SARS2Q9NP81 518 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 MTMR4Q9NYA4 1195 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 AIPL1Q9NZN9 384 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 MOSPD1Q9UJG1 213 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 CYP2D6P10635 497 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 RBP5P82980 135 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 BYSLQ13895 437 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 FAM47EQ6ZV65 393 aa5.76□□□□□ -1.49
VPS13C-204ENST00000395898 INTS2Q9H0H0 1204 aaKnown RBP5.76□□□□□ -1.49
VPS13C-204ENST00000395898 DFFAO00273 331 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 CSPG5O95196 566 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 IL18RAPO95256 599 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 MAP4P27816 1152 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ACADSBP45954 432 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 NFRKBQ6P4R8 1299 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RNF149Q8NC42 400 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 OR6J1Q8NGC5 347 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TSPAN17Q96FV3 270 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 OTUD5Q96G74 571 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 FAM129AQ9BZQ8 928 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TRIM9Q9C026 710 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 VIPAS39Q9H9C1 493 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 PCSK1NQ9UHG2 260 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 PNPLA6Q8IY17 1366 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RNF103-CHMP3A0A140T963 221 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 GOLGA8TH3BQL2 631 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 CDH16O75309 829 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TADA2AO75478 443 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ARFIP2P53365 341 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TMEM259Q4ZIN3 620 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 EPHA10Q5JZY3 1008 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SAAL1Q96ER3 474 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ATP6V1G3Q96LB4 118 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 C17orf75Q9HAS0 396 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 FLT1P17948 1338 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 IGSF9BQ9UPX0 1349 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 HNRNPRO43390 633 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 KRT4P19013 534 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ITIH2P19823 946 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TERF2Q15554 542 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 WDR72Q3MJ13 1102 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 STAG2Q8N3U4 1231 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 COG1Q8WTW3 980 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RMDN1Q96DB5 314 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 DCUN1D1Q96GG9 259 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 NSMCE4AQ9NXX6 385 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ZC3H4Q9UPT8 1303 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 OCM2P0CE71 109 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 OCMP0CE72 109 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 MUTP22033 750 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 IL10P22301 178 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 PID1Q7Z2X4 250 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 GJD4Q96KN9 370 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SLC7A5P2Q9GIP4 190 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 WWP1Q9H0M0 922 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 NDFIP2Q9NV92 336 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ARHGAP10A1A4S6 786 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 KRT87PA6NCN2 255 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RHOBTB3O94955 611 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SHC4Q6S5L8 630 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 KRT35Q92764 455 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SIK2Q9H0K1 926 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 C3orf70A6NLC5 250 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 PI4K2BG5E9Z4 385 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 MTSS1O43312 755 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SPAG6O75602 509 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TDP2O95551 362 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 KRT17Q04695 432 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 HIC1Q14526 733 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SNX17Q15036 470 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 LRRC23Q53EV4 343 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 FASTKD1Q53R41 847 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ANKRD40Q6AI12 368 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 XRRA1Q6P2D8 792 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RASGRP2Q7LDG7 609 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 GPR101Q96P66 508 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TSC22D3Q99576 134 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TMEM260Q9NX78 707 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 LSM7Q9UK45 103 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ZNRF3Q9ULT6 936 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 PIN4Q9Y237 131 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms