RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 LRMPQ12912 555 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 TBX2Q13207 712 aaPredicted RBP14.82□□□□□ -0.04
VAPB-202ENST00000395802 LRRC8DQ7L1W4 858 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 CDR2LQ86X02 465 aaPredicted RBP14.82□□□□□ -0.04
VAPB-202ENST00000395802 ZSWIM2Q8NEG5 633 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 TRAIPQ9BWF2 469 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 FTHL17Q9BXU8 183 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 MCOLN1Q9GZU1 580 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 FBXL5Q9UKA1 691 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 PADI3Q9ULW8 664 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 SIK3Q9Y2K2 1263 aa14.82□□□□□ -0.04
VAPB-202ENST00000395802 LUC7L2Q9Y383 392 aaKnown RBP14.82□□□□□ -0.04
VAPB-202ENST00000395802 GHRP10912 638 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 TNFSF9P41273 254 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
VAPB-202ENST00000395802 ATN1P54259 1190 aaPredicted RBP14.81□□□□□ -0.04
VAPB-202ENST00000395802 OSTNP61366 133 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 CACNA2D4Q7Z3S7 1137 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 FBXL13Q8NEE6 735 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 FAM212AQ96EL1 285 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 ANKRD36BP1Q96IX9 119 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 TMEM117Q9H0C3 514 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 PDE11AQ9HCR9 933 aa14.81□□□□□ -0.04
VAPB-202ENST00000395802 R3HCC1Q9Y3T6 440 aaKnown RBP14.81□□□□□ -0.04
VAPB-202ENST00000395802 ZNF500O60304 480 aaPredicted RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 ZC3H11AO75152 810 aaKnown RBP eCLIP14.8□□□□□ -0.04
VAPB-202ENST00000395802 TNNC2P02585 160 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 PPP3CAQ08209 521 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 LPIN1Q14693 890 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 ENOX2Q16206 610 aaKnown RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 CBWD6Q4V339 395 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 CBWD3Q5JTY5 395 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 CBWD5Q5RIA9 395 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 ZBTB41Q5SVQ8 909 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 SV2AQ7L0J3 742 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 CCDC112Q8NEF3 446 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 CRACR2AQ9BSW2 395 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 ERVK-5Q9HDB9 667 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 FAM207AQ9NSI2 230 aaPredicted RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 CAPN11Q9UMQ6 739 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 DERAQ9Y315 318 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 COQ4Q9Y3A0 265 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 C2CD2Q9Y426 696 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 XPOTO43592 962 aaKnown RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 PHACTR2O75167 634 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 TMEM191BP0C7N4 346 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 CXCL8P10145 99 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 PON1P27169 355 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 CD52P31358 61 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 KCNMA1Q12791 1236 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 BIRC3Q13489 604 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 ZACNQ401N2 412 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 SEZ6Q53EL9 994 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 TRIM65Q6PJ69 517 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 EHBP1Q8NDI1 1231 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 APBB2Q92870 758 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 PAWRQ96IZ0 340 aaKnown RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 LSM14BQ9BX40 385 aaKnown RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 IFIH1Q9BYX4 1025 aaKnown RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 IMPG2Q9BZV3 1241 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 UBN1Q9NPG3 1134 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 ZNHIT6Q9NWK9 470 aaKnown RBP14.8□□□□□ -0.04
VAPB-202ENST00000395802 CEP72Q9P209 647 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 PYCARDQ9ULZ3 195 aa14.8□□□□□ -0.04
VAPB-202ENST00000395802 GYPCP04921 128 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 CASP14P31944 242 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 ZBED6P86452 979 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 CCZ1BP86790 482 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 CCZ1P86791 482 aaPredicted RBP14.79□□□□□ -0.04
VAPB-202ENST00000395802 TLE2Q04725 743 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 TRIM60Q495X7 471 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 WDR44Q5JSH3 913 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 C1orf220Q5T0J3 134 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 CEP120Q8N960 986 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 PLEKHO2Q8TD55 490 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 CPLX3Q8WVH0 158 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 PGBD4Q96DM1 585 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 PANX2Q96RD6 677 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 POP1Q99575 1024 aaKnown RBP14.79□□□□□ -0.04
VAPB-202ENST00000395802 NAA15Q9BXJ9 866 aaKnown RBP14.79□□□□□ -0.04
VAPB-202ENST00000395802 EIF2AQ9BY44 585 aaKnown RBP14.79□□□□□ -0.04
VAPB-202ENST00000395802 HIPK3Q9H422 1215 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 AGO3Q9H9G7 860 aaKnown RBP14.79□□□□□ -0.04
VAPB-202ENST00000395802 FAM105AQ9NUU6 356 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 RAB20Q9NX57 234 aa14.79□□□□□ -0.04
VAPB-202ENST00000395802 TTC26A0AVF1 554 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 MFAP3LO75121 409 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 C4BPAP04003 597 aaKnown RBP14.78□□□□□ -0.04
VAPB-202ENST00000395802 TFAMQ00059 246 aaKnown RBP14.78□□□□□ -0.04
VAPB-202ENST00000395802 OR8K1Q8NGG5 319 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 KIAA1524Q8TCG1 905 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 SNTG2Q9NY99 539 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 APEX2Q9UBZ4 518 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 MYO6Q9UM54 1294 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 IPPQ9Y573 584 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 PCDHB2Q9Y5E7 798 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 LACTBL1A8MY62 500 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 ZNF623O75123 536 aa14.78□□□□□ -0.04
VAPB-202ENST00000395802 CLTBP09497 229 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms