RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 C7orf72A4D263 438 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 SMAD7O15105 426 aaKnown RBP6.66□□□□□ -1.34
AP3S1-202ENST00000395548 ACTN1P12814 892 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 CYP2C18P33260 490 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 LIMS1P48059 325 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 FOXO4P98177 505 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 ARID5AQ03989 594 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 SCRN1Q12765 414 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 VMACQ2NL98 169 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 TMED8Q6PL24 325 aaPredicted RBP6.66□□□□□ -1.34
AP3S1-202ENST00000395548 TRIM59Q8IWR1 403 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 GDPD5Q8WTR4 605 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 RUBCNQ92622 972 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 RELTQ969Z4 430 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 C20orf173Q96LM9 149 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 GLT1D1Q96MS3 346 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 MTA3Q9BTC8 594 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 LUC7LQ9NQ29 371 aaKnown RBP6.66□□□□□ -1.34
AP3S1-202ENST00000395548 SLC5A4Q9NY91 659 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 MRVI1Q9Y6F6 885 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 MAST3O60307 1309 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 ELP1O95163 1332 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 SPTBN2O15020 2390 aa6.66□□□□□ -1.34
AP3S1-202ENST00000395548 SPEGQ15772 3267 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 KRTAP9-7A8MTY7 169 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 B8ZZF3 427 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 PRRG2O14669 202 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 PPP1R11O60927 126 aaPredicted RBP6.65□□□□□ -1.34
AP3S1-202ENST00000395548 PLS3P13797 630 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 ATF2P15336 505 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 HOXA7P31268 230 aaPredicted RBP6.65□□□□□ -1.34
AP3S1-202ENST00000395548 ACLYP53396 1101 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 ATXN1P54253 815 aaKnown RBP6.65□□□□□ -1.34
AP3S1-202ENST00000395548 HMGCS2P54868 508 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 SPP2Q13103 211 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 TAF7LQ5H9L4 462 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 WDR78Q5VTH9 848 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 GTF2IRD2BQ6EKJ0 949 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 IQCEQ6IPM2 695 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 DPP9Q86TI2 863 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 GTF2IRD2Q86UP8 949 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 CCDC191Q8NCU4 936 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 TBC1D22AQ8WUA7 517 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 RTKNQ9BST9 563 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 OSBPL2Q9H1P3 480 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 HIPK3Q9H422 1215 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 PANK3Q9H999 370 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 TXNRD2Q9NNW7 524 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 GPRC5CQ9NQ84 441 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 CLEC1BQ9P126 229 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 BCCIPQ9P287 314 aaKnown RBP eCLIP6.65□□□□□ -1.34
AP3S1-202ENST00000395548 RBPJLQ9UBG7 517 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 NRBP1Q9UHY1 535 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 ANGPTL2Q9UKU9 493 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 KNSTRNQ9Y448 316 aa6.65□□□□□ -1.34
AP3S1-202ENST00000395548 FRYQ5TBA9 3013 aa6.65□□□□□ -1.35
AP3S1-202ENST00000395548 PRR5-ARHGAP8B1AHC4 643 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 STK10O94804 968 aaKnown RBP6.64□□□□□ -1.35
AP3S1-202ENST00000395548 FUCA1P04066 466 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 ASGR2P07307 311 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 HSD3B2P26439 372 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 CDK7P50613 346 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 ARHGAP8P85298 464 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 CHRNDQ07001 517 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 TCP10Q12799 353 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 GRB14Q14449 540 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 NFE2L2Q16236 605 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 FXNQ16595 210 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 LARP1BQ659C4 914 aaKnown RBP6.64□□□□□ -1.35
AP3S1-202ENST00000395548 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 APOBEC3HQ6NTF7 200 aaKnown RBP6.64□□□□□ -1.35
AP3S1-202ENST00000395548 LRSAM1Q6UWE0 723 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 EXOC8Q8IYI6 725 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 TTLL11Q8NHH1 800 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 NPLOC4Q8TAT6 608 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 MRGPRX3Q96LB0 322 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 RIPOR3Q96MK2 946 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 PAGR1Q9BTK6 254 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 XYLT2Q9H1B5 865 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 GREM2Q9H772 168 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 PRDM16Q9HAZ2 1276 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 TMOD4Q9NZQ9 345 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 LRP2BPQ9P2M1 347 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 ANKFY1Q9P2R3 1169 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 PMF1-BGLAPU3KQ54 211 aa6.64□□□□□ -1.35
AP3S1-202ENST00000395548 A0A0U1RQG5 324 aaPredicted RBP6.63□□□□□ -1.35
AP3S1-202ENST00000395548 ARVCFO00192 962 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 NCANO14594 1321 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 MBTPS2O43462 519 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 PGK1P00558 417 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 THBDP07204 575 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 PROS1P07225 676 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 SMAD4Q13485 552 aaKnown RBP6.63□□□□□ -1.35
AP3S1-202ENST00000395548 BMS1Q14692 1282 aaKnown RBP6.63□□□□□ -1.35
AP3S1-202ENST00000395548 SV2CQ496J9 727 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 HHIPL2Q6UWX4 724 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 C6orf15Q6UXA7 325 aaPredicted RBP6.63□□□□□ -1.35
AP3S1-202ENST00000395548 B3GNT8Q7Z7M8 397 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms