RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 DIS3Q9Y2L1 958 aaKnown RBP15.28■□□□□ 0.04
CLIP2-203ENST00000395060 MIF4GDA9UHW6 222 aaKnown RBP15.28■□□□□ 0.04
CLIP2-203ENST00000395060 GOLGA8RI6L899 631 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 BANF1O75531 89 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 BBOX1O75936 387 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 TTC4O95801 387 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 LINGO3P0C6S8 592 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 ZSCAN5DPP0CG00 497 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 RRM1P23921 792 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 CRY2Q49AN0 593 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 ZNF720Q7Z2F6 126 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 FBXO11Q86XK2 927 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 DTX3LQ8TDB6 740 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 BMP3P12645 472 aa15.27■□□□□ 0.04
CLIP2-203ENST00000395060 TAC1P20366 129 aa15.27■□□□□ 0.04
CLIP2-203ENST00000395060 DRG2P55039 364 aaKnown RBP15.27■□□□□ 0.04
CLIP2-203ENST00000395060 GABPAQ06546 454 aa15.27■□□□□ 0.04
CLIP2-203ENST00000395060 SETDB1Q15047 1291 aa15.27■□□□□ 0.04
CLIP2-203ENST00000395060 SIX1Q15475 284 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-203ENST00000395060 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
CLIP2-203ENST00000395060 CPA5Q8WXQ8 436 aa15.27■□□□□ 0.04
CLIP2-203ENST00000395060 VAV3Q9UKW4 847 aa15.27■□□□□ 0.04
CLIP2-203ENST00000395060 PI4K2BG5E9Z4 385 aa15.27■□□□□ 0.03
CLIP2-203ENST00000395060 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.03
CLIP2-203ENST00000395060 SMIM24O75264 130 aa15.27■□□□□ 0.03
CLIP2-203ENST00000395060 IL1R1P14778 569 aa15.27■□□□□ 0.03
CLIP2-203ENST00000395060 WDR4P57081 412 aaKnown RBP15.27■□□□□ 0.03
CLIP2-203ENST00000395060 PASD1Q8IV76 773 aa15.27■□□□□ 0.03
CLIP2-203ENST00000395060 CERS5Q8N5B7 392 aa15.27■□□□□ 0.03
CLIP2-203ENST00000395060 WDR18Q9BV38 432 aa15.27■□□□□ 0.03
CLIP2-203ENST00000395060 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.03
CLIP2-203ENST00000395060 POLRMTO00411 1230 aaKnown RBP15.26■□□□□ 0.03
CLIP2-203ENST00000395060 RGL2O15211 777 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 UNC5CO95185 931 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 PSMC4P43686 418 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 MXRA7P84157 204 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 FASTKD3Q14CZ7 662 aaKnown RBP15.26■□□□□ 0.03
CLIP2-203ENST00000395060 LMBRD2Q68DH5 695 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-203ENST00000395060 PPP1R18Q6NYC8 613 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 EPS8L1Q8TE68 723 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 TBC1D22AQ8WUA7 517 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 ACSF2Q96CM8 615 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-203ENST00000395060 LRRC37BQ96QE4 947 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 KIFC3Q9BVG8 833 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 CCDC134Q9H6E4 229 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 PHTF1Q9UMS5 762 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 CHKBQ9Y259 395 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 GAS7O60861 476 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 ETS1P14921 441 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 CD58P19256 250 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 EAPPQ56P03 285 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-203ENST00000395060 BTNL9Q6UXG8 535 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 C1orf186Q6ZWK4 172 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 APBB1IPQ7Z5R6 666 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-203ENST00000395060 FAM13CQ8NE31 585 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 AMNQ9BXJ7 453 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 NPHS2Q9NP85 383 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 GPRC5CQ9NQ84 441 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
CLIP2-203ENST00000395060 GTPBP10A4D1E9 387 aaKnown RBP15.26■□□□□ 0.03
CLIP2-203ENST00000395060 MAPK4P31152 587 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 VAMP7P51809 220 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 ARHGEF18Q6ZSZ5 1173 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 PLEKHO2Q8TD55 490 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 VPS37BQ9H9H4 285 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 USP20Q9Y2K6 914 aa15.26■□□□□ 0.03
CLIP2-203ENST00000395060 EXOC1LA0A1B0GW35 172 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 ARHGEF35A5YM69 484 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 F5H6K3 240 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 ALADP13716 330 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 KIF22Q14807 665 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 RFWD3Q6PCD5 774 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 ZNF365Q70YC5 407 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 TRMT10CQ7L0Y3 403 aaKnown RBP15.25■□□□□ 0.03
CLIP2-203ENST00000395060 ASRGL1Q7L266 308 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 GBP7Q8N8V2 638 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-203ENST00000395060 GLIS1Q8NBF1 620 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 SNF8Q96H20 258 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 SERPINB12Q96P63 405 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 TBC1D10AQ9BXI6 508 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 SAYSD1Q9NPB0 183 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 BATF3Q9NR55 127 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 ZFATQ9P243 1243 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 FRMPD4Q14CM0 1322 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 C2orf71A6NGG8 1288 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 HLA-DOAP06340 250 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 CYP3A4P08684 503 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 RALAP11233 206 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 CA4P22748 312 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 GRIK3Q13003 919 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 SYCP2LQ5T4T6 812 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 MFSD5Q6N075 450 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 LMO3Q8TAP4 145 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 UCMAQ8WVF2 138 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 TMEM117Q9H0C3 514 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 WNT8AQ9H1J5 351 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 C10orf88Q9H8K7 445 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 UBN1Q9NPG3 1134 aa15.25■□□□□ 0.03
CLIP2-203ENST00000395060 IGKV6D-41A0A0C4DH26 115 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms