RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 EME1Q96AY2 570 aa12.9□□□□□ -0.34
SIN3A-202ENST00000394947 ACSF2Q96CM8 615 aaPredicted RBP12.9□□□□□ -0.34
SIN3A-202ENST00000394947 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
SIN3A-202ENST00000394947 ACAP3Q96P50 834 aa12.9□□□□□ -0.34
SIN3A-202ENST00000394947 SMARCAL1Q9NZC9 954 aa12.9□□□□□ -0.34
SIN3A-202ENST00000394947 PPIEQ9UNP9 301 aaKnown RBP12.9□□□□□ -0.34
SIN3A-202ENST00000394947 VAMP7P51809 220 aa12.9□□□□□ -0.34
SIN3A-202ENST00000394947 RAB42Q8N4Z0 105 aa12.9□□□□□ -0.34
SIN3A-202ENST00000394947 PABPC5Q96DU9 382 aaKnown RBP12.9□□□□□ -0.34
SIN3A-202ENST00000394947 SNF8Q96H20 258 aa12.9□□□□□ -0.34
SIN3A-202ENST00000394947 FHDC1Q9C0D6 1143 aaPredicted RBP12.9□□□□□ -0.34
SIN3A-202ENST00000394947 PDE8BO95263 885 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 APRTP07741 180 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 MYBL1P10243 752 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 TWF1Q12792 350 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 DRAP1Q14919 205 aaPredicted RBP12.9□□□□□ -0.35
SIN3A-202ENST00000394947 ARHGEF6Q15052 776 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.35
SIN3A-202ENST00000394947 CCDC60Q8IWA6 550 aaPredicted RBP12.9□□□□□ -0.35
SIN3A-202ENST00000394947 SH2D3CQ8N5H7 860 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 SPATA33Q96N06 139 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 CUEDC2Q9H467 287 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 OLFML3Q9NRN5 406 aa12.9□□□□□ -0.35
SIN3A-202ENST00000394947 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.89□□□□□ -0.35
SIN3A-202ENST00000394947 DEAF1O75398 565 aaPredicted RBP12.89□□□□□ -0.35
SIN3A-202ENST00000394947 CCNE1P24864 410 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 BCAR1P56945 870 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 CHORDC1Q9UHD1 332 aaPredicted RBP12.89□□□□□ -0.35
SIN3A-202ENST00000394947 IQGAP2Q13576 1575 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 SH2B2O14492 632 aaPredicted RBP12.89□□□□□ -0.35
SIN3A-202ENST00000394947 P4HA2O15460 535 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 KCNH2Q12809 1159 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 LUZP2Q86TE4 346 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 KAT2BQ92831 832 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 OSBPL9Q96SU4 736 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 CARD9Q9H257 536 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 SPASTQ9UBP0 616 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 SYNGAP1Q96PV0 1343 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 TPI1P60174 286 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.355e-6■■■■■ 45.5
SIN3A-202ENST00000394947 OR2W6PQ8NHA6 318 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 INTS2Q9H0H0 1204 aaKnown RBP12.89□□□□□ -0.35
SIN3A-202ENST00000394947 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 AMACRQ9UHK6 382 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 PNMA6FA0A0J9YX94 578 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 MLNP12872 115 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 KCNA3P22001 575 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 INPP5AQ14642 412 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 TBC1D9BQ66K14 1250 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 EXOC4Q96A65 974 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 TM6SF1Q9BZW5 370 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 PLEKHA5Q9HAU0 1116 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 CHL1O00533 1208 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 ASAP2O43150 1006 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 SPATA2LQ8IUW3 424 aaPredicted RBP12.89□□□□□ -0.35
SIN3A-202ENST00000394947 AHI1Q8N157 1196 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 LINC00301Q8NCQ3 95 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 SMARCAD1Q9H4L7 1026 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
SIN3A-202ENST00000394947 ADAM21Q9UKJ8 722 aa12.89□□□□□ -0.35
SIN3A-202ENST00000394947 ZNF197O14709 1029 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 ADD2P35612 726 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 NFIL3Q16649 462 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 MMP19Q99542 508 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 PTPRHQ9HD43 1115 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 FAM49BQ9NUQ9 324 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 MRPL42Q9Y6G3 142 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 RPRD2Q5VT52 1461 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 USP17L10C9JJH3 530 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 COASYQ13057 564 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 DYNC1I2Q13409 638 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 SMTNL2Q2TAL5 461 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 SLFN12LQ6IEE8 588 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 TMEM35BQ8NCS4 154 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 TRIM51Q9BSJ1 452 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 SATB2Q9UPW6 733 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 ATP1A1P05023 1023 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 SERPINB4P48594 390 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 TMED10P49755 219 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 SURF1Q15526 300 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 RHOT2Q8IXI1 618 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 WNK4Q96J92 1243 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 IQCMA0A1B0GVH7 501 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 CYP26A1O43174 497 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 USP10Q14694 798 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 P3H1Q32P28 736 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 ZRANB3Q5FWF4 1079 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 WRNIP1Q96S55 665 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 MRPL40Q9NQ50 206 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 ENDOD1O94919 500 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 AKR1B1P15121 316 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 PHKA2P46019 1235 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 TRIM71Q2Q1W2 868 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 OSBP2Q969R2 916 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 GCOM2Q9BZD3 368 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms