RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SLC16A4O15374 487 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 FTLP02792 175 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 DPEP1P16444 411 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 RNASELQ05823 741 aaKnown RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 RBBP5Q15291 538 aaKnown RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 PLA2G4FQ68DD2 849 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 CCDC50Q8IVM0 306 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 RPUSD2Q8IZ73 545 aaKnown RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 ANKS4BQ8N8V4 417 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 HELQQ8TDG4 1101 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 DDX1Q92499 740 aaKnown RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 LPAR1Q92633 364 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 MAP3K20Q9NYL2 800 aaKnown RBP16.65■□□□□ 0.26
PTBP1-204ENST00000394601 SLC12A6Q9UHW9 1150 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 SIP14410 1827 aa16.65■□□□□ 0.26
PTBP1-204ENST00000394601 SHBGP04278 402 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 POLE2P56282 527 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 ZNF211Q13398 564 aaPredicted RBP16.64■□□□□ 0.25
PTBP1-204ENST00000394601 ZDHHC24Q6UX98 284 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 CCDC25Q86WR0 208 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 FBXL18Q96ME1 805 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 VPS33BQ9H267 617 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 MYOZ2Q9NPC6 264 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 PDLIM7Q9NR12 457 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 PXMP2Q9NR77 195 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 TBC1D22BQ9NU19 505 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 TMOD4Q9NZQ9 345 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 RIPK3Q9Y572 518 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 EIF2AK2P19525 551 aaKnown RBP16.64■□□□□ 0.25
PTBP1-204ENST00000394601 SNRPFP62306 86 aaKnown RBP16.64■□□□□ 0.25
PTBP1-204ENST00000394601 PPP2R2AP63151 447 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 FMO1Q01740 532 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 RASA3Q14644 834 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 SLC47A2Q86VL8 602 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 LONP2Q86WA8 852 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 ERICH1Q86X53 443 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 MCF2L2Q86YR7 1114 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 ANKRD42Q8N9B4 389 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 SHC3Q92529 594 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 PDCD2LQ9BRP1 358 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 KIFC3Q9BVG8 833 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 ABCF3Q9NUQ8 709 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 ADGRA3Q8IWK6 1321 aa16.64■□□□□ 0.25
PTBP1-204ENST00000394601 PPFIA2O75334 1257 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 RGS20O76081 388 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 MMEP08473 750 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 ALAS1P13196 640 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 CTNNA2P26232 953 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 PEX3P56589 373 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 SIX1Q15475 284 aaPredicted RBP16.63■□□□□ 0.25
PTBP1-204ENST00000394601 TAF11Q15544 211 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 ZNF772Q68DY9 489 aaPredicted RBP16.63■□□□□ 0.25
PTBP1-204ENST00000394601 ZNF746Q6NUN9 644 aaPredicted RBP16.63■□□□□ 0.25
PTBP1-204ENST00000394601 MAP4K3Q8IVH8 894 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 REPS2Q8NFH8 660 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 GLG1Q92896 1179 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 POP1Q99575 1024 aaKnown RBP16.63■□□□□ 0.25
PTBP1-204ENST00000394601 SH3GL3Q99963 347 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 SAMD15Q9P1V8 674 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 TBX20Q9UMR3 447 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 KCNA4P22459 653 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 RANBP1P43487 201 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 RHOT2Q8IXI1 618 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 CPXCR1Q8N123 301 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 KLHL29Q96CT2 875 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 NTPCRQ9BSD7 190 aaKnown RBP16.63■□□□□ 0.25
PTBP1-204ENST00000394601 HOMER2Q9NSB8 354 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 ZNF862O60290 1169 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 RTN2O75298 545 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 KRT13P13646 458 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 NPTX2P47972 431 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 INHBEP58166 350 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 EN1Q05925 392 aaPredicted RBP16.63■□□□□ 0.25
PTBP1-204ENST00000394601 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
PTBP1-204ENST00000394601 TTC27Q6P3X3 843 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 PRELID2Q8N945 189 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 SPIRE2Q8WWL2 714 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 PAGR1Q9BTK6 254 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 TIPINQ9BVW5 301 aa16.63■□□□□ 0.25
PTBP1-204ENST00000394601 GOLGA8IPA6NC78 632 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 GOLGA8JA6NMD2 632 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 FOXO6A8MYZ6 492 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 TRAPPC3O43617 180 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 USP4Q13107 963 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 SNRNP35Q16560 246 aaKnown RBP16.62■□□□□ 0.25
PTBP1-204ENST00000394601 UBAP2Q5T6F2 1119 aaKnown RBP16.62■□□□□ 0.25
PTBP1-204ENST00000394601 TAS1R3Q7RTX0 852 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 MFSD14AQ96MC6 490 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 PRMT1Q99873 361 aaKnown RBP16.62■□□□□ 0.25
PTBP1-204ENST00000394601 GRHL1Q9NZI5 618 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 A6NNZ2 444 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 TP73O15350 636 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 GZMAP12544 262 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 SOX10P56693 466 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 PSMC5P62195 406 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 TUBB8Q3ZCM7 444 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 ELMO3Q96BJ8 720 aa16.62■□□□□ 0.25
PTBP1-204ENST00000394601 PAIP2Q9BPZ3 127 aaKnown RBP16.62■□□□□ 0.25
PTBP1-204ENST00000394601 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms