RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CENPKQ9BS16 269 aa20.13■□□□□ 0.81
HOXC6-202ENST00000394331 H0Y3Z8 333 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 PHF2O75151 1096 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 TMCC1O94876 653 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 H2AFZP0C0S5 128 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 TAC1P20366 129 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 EPHB2P29323 1055 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 SLC34A1Q06495 639 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 CCDC6Q16204 474 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 H2AFVQ71UI9 128 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 CCNJLQ8IV13 435 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 ZDHHC15Q96MV8 337 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 TAOK3Q9H2K8 898 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 SAR1AQ9NR31 198 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 TRPC5Q9UL62 973 aaPredicted RBP20.12■□□□□ 0.81
HOXC6-202ENST00000394331 NCANO14594 1321 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 PFASO15067 1338 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 ADGRA3Q8IWK6 1321 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 GFPT2O94808 682 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 EEF2P13639 858 aaKnown RBP20.12■□□□□ 0.81
HOXC6-202ENST00000394331 CYP11B2P19099 503 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 LRRC74BQ6ZQY2 392 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 CYFIP1Q7L576 1253 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 ZC3H18Q86VM9 953 aaKnown RBP20.12■□□□□ 0.81
HOXC6-202ENST00000394331 PPFIBP2Q8ND30 876 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 SMC1BQ8NDV3 1235 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 ART4Q93070 314 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 MRIQ9BWK5 157 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 PITPNM3Q9BZ71 974 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 PPP1R12CQ9BZL4 782 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 EMILIN3Q9NT22 766 aa20.12■□□□□ 0.81
HOXC6-202ENST00000394331 POTEB3A0JP26 581 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 POTECB2RU33 542 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 KRT18P05783 430 aaKnown RBP20.11■□□□□ 0.81
HOXC6-202ENST00000394331 ALAS1P13196 640 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 MOGSQ13724 837 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 POTEBQ6S5H4 581 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 RGS9BPQ6ZS82 235 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 TBC1D7Q9P0N9 293 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 PI4KBQ9UBF8 816 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 RAD21O60216 631 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 FAM200BP0CF97 657 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 RPL21P46778 160 aaKnown RBP20.11■□□□□ 0.81
HOXC6-202ENST00000394331 INHBCP55103 352 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 ARID5AQ03989 594 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 DEUP1Q05D60 604 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 EDRF1Q3B7T1 1238 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 CERKLQ49MI3 558 aaPredicted RBP20.11■□□□□ 0.81
HOXC6-202ENST00000394331 RASIP1Q5U651 963 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 DCAF12L1Q5VU92 463 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 PODNQ7Z5L7 613 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 ERMNQ8TAM6 284 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 C7orf43Q8WVR3 580 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 ZNF212Q9UDV6 495 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 STK24Q9Y6E0 443 aa20.11■□□□□ 0.81
HOXC6-202ENST00000394331 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.11■□□□□ 0.81
HOXC6-202ENST00000394331 TBX3O15119 743 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 FGFR4P22455 802 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 VPS36Q86VN1 386 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 SCFD1Q8WVM8 642 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 NRG4Q8WWG1 115 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 GLG1Q92896 1179 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 SLX1AQ9BQ83 275 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 DNAJC18Q9H819 358 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 ARMCX3Q9UH62 379 aaPredicted RBP20.1■□□□□ 0.81
HOXC6-202ENST00000394331 ATP6V1G1O75348 118 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 LIN52Q52LA3 116 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 ZC3H3Q8IXZ2 948 aaKnown RBP20.1■□□□□ 0.81
HOXC6-202ENST00000394331 NLGN1Q8N2Q7 840 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 KCTD10Q9H3F6 313 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 STX18Q9P2W9 335 aaKnown RBP20.1■□□□□ 0.81
HOXC6-202ENST00000394331 LGALS13Q9UHV8 139 aa20.1■□□□□ 0.81
HOXC6-202ENST00000394331 KHDC1Q4VXA5 237 aaKnown RBP20.09■□□□□ 0.81
HOXC6-202ENST00000394331 ZFPM1Q8IX07 1006 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 IRGQQ8WZA9 623 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 ZNF184Q99676 751 aaPredicted RBP20.09■□□□□ 0.81
HOXC6-202ENST00000394331 AMNQ9BXJ7 453 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 ERVK-5Q9HDB9 667 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 GREB1LQ9C091 1923 aaPredicted RBP20.09■□□□□ 0.81
HOXC6-202ENST00000394331 LYNP07948 512 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 CDK7P50613 346 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 ARHGAP4P98171 946 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 RRP1BQ14684 758 aaKnown RBP20.09■□□□□ 0.81
HOXC6-202ENST00000394331 UBAP2Q5T6F2 1119 aaKnown RBP20.09■□□□□ 0.81
HOXC6-202ENST00000394331 FGFBP2Q9BYJ0 223 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 NKIRAS1Q9NYS0 192 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 MEIS2O14770 477 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 BRAFP15056 766 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 SLC12A3P55017 1021 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 IL9RQ01113 521 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 DAB2IPQ5VWQ8 1189 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 DPY19L2P1Q6NXN4 242 aa20.09■□□□□ 0.81
HOXC6-202ENST00000394331 MAP3K7O43318 606 aa20.08■□□□□ 0.81
HOXC6-202ENST00000394331 MED24O75448 989 aa20.08■□□□□ 0.81
HOXC6-202ENST00000394331 GGPS1O95749 300 aa20.08■□□□□ 0.81
HOXC6-202ENST00000394331 FOSP01100 380 aaPredicted RBP20.08■□□□□ 0.81
HOXC6-202ENST00000394331 EPS15P42566 896 aa20.08■□□□□ 0.81
HOXC6-202ENST00000394331 PPATQ06203 517 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms