RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 CCDC137Q6PK04 289 aaKnown RBP20.97■□□□□ 0.95
RCCD1-201ENST00000394258 RUFY4Q6ZNE9 571 aa20.97■□□□□ 0.95
RCCD1-201ENST00000394258 GPD1LQ8N335 351 aa20.97■□□□□ 0.95
RCCD1-201ENST00000394258 CYP26B1Q9NR63 512 aa20.97■□□□□ 0.95
RCCD1-201ENST00000394258 COQ4Q9Y3A0 265 aa20.97■□□□□ 0.95
RCCD1-201ENST00000394258 PPP2R2AP63151 447 aa20.97■□□□□ 0.95
RCCD1-201ENST00000394258 B4GALNT4Q76KP1 1039 aa20.97■□□□□ 0.95
RCCD1-201ENST00000394258 ZNF516Q92618 1163 aa20.97■□□□□ 0.95
RCCD1-201ENST00000394258 A1CFQ9NQ94 594 aaKnown RBP20.97■□□□□ 0.95
RCCD1-201ENST00000394258 RGS17Q9UGC6 210 aaPredicted RBP20.97■□□□□ 0.95
RCCD1-201ENST00000394258 CAPN7Q9Y6W3 813 aa20.97■□□□□ 0.95
RCCD1-201ENST00000394258 PHF2O75151 1096 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 WNT7BP56706 349 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 FSTL1Q12841 308 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 SPOPLQ6IQ16 392 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 REPS2Q8NFH8 660 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 ZNF526Q8TF50 670 aaPredicted RBP20.96■□□□□ 0.95
RCCD1-201ENST00000394258 SPIRE2Q8WWL2 714 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 CPA5Q8WXQ8 436 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 DDX1Q92499 740 aaKnown RBP20.96■□□□□ 0.95
RCCD1-201ENST00000394258 RNF25Q96BH1 459 aaPredicted RBP20.96■□□□□ 0.95
RCCD1-201ENST00000394258 RPS6KC1Q96S38 1066 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 PMM2O15305 246 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 DGAT1O75907 488 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 FAM107AO95990 144 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 TNNI1P19237 187 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 RPL21P46778 160 aaKnown RBP20.96■□□□□ 0.95
RCCD1-201ENST00000394258 SP2Q02086 613 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 BIRC3Q13489 604 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 CCDC105Q8IYK2 499 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 SAMD3Q8N6K7 520 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 TMC2Q8TDI7 906 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 IFT74Q96LB3 600 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 FBXL18Q96ME1 805 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 CYP39A1Q9NYL5 469 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 GRHL1Q9NZI5 618 aa20.96■□□□□ 0.95
RCCD1-201ENST00000394258 TLDC2A0PJX2 215 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 GRIN3BO60391 1043 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 CYP1A2P05177 515 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 DSG3P32926 999 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 LIG4P49917 911 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 IFT88Q13099 833 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 RNF187Q5TA31 235 aaPredicted RBP20.95■□□□□ 0.94
RCCD1-201ENST00000394258 ANGEL2Q5VTE6 544 aaKnown RBP20.95■□□□□ 0.94
RCCD1-201ENST00000394258 DAB2IPQ5VWQ8 1189 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 CD101Q93033 1021 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 WNT8AQ9H1J5 351 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 PNMA2Q9UL42 364 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 DHX34Q14147 1143 aaKnown RBP20.95■□□□□ 0.94
RCCD1-201ENST00000394258 EP400NLQ6ZTU2 488 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 CCDC91Q7Z6B0 441 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 ARFGAP2Q8N6H7 521 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 OTUD6BQ8N6M0 293 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 CYFIP2Q96F07 1278 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 ZBTB45Q96K62 511 aaPredicted RBP20.95■□□□□ 0.94
RCCD1-201ENST00000394258 ATP6V0A4Q9HBG4 840 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 GTF3C4Q9UKN8 822 aa20.95■□□□□ 0.94
RCCD1-201ENST00000394258 FAM187AA6NFU0 413 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 MEFVO15553 781 aaPredicted RBP20.94■□□□□ 0.94
RCCD1-201ENST00000394258 RARAP10276 462 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 PMS2P54278 862 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 SF3A3Q12874 501 aaKnown RBP eCLIP20.94■□□□□ 0.947e-8■■■■□ 25.9
RCCD1-201ENST00000394258 PPP2R5EQ16537 467 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 AGBL2Q5U5Z8 902 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 DCAF15Q66K64 600 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 ACAD10Q6JQN1 1059 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 MCPH1Q8NEM0 835 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 RDM1Q8NG50 284 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 RAPGEF5Q92565 580 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 RASAL2Q9UJF2 1139 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 ANAPC7Q9UJX3 599 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 COL11A1P12107 1806 aaPredicted RBP20.94■□□□□ 0.94
RCCD1-201ENST00000394258 CLDN3O15551 220 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 CHRNA3P32297 505 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 POLGP54098 1239 aaPredicted RBP20.94■□□□□ 0.94
RCCD1-201ENST00000394258 NLRP11P59045 1033 aaKnown RBP20.94■□□□□ 0.94
RCCD1-201ENST00000394258 SNX1Q13596 522 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 BRDTQ58F21 947 aaPredicted RBP20.94■□□□□ 0.94
RCCD1-201ENST00000394258 SLC13A5Q86YT5 568 aaPredicted RBP20.94■□□□□ 0.94
RCCD1-201ENST00000394258 HVCN1Q96D96 273 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 SENP7Q9BQF6 1050 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 SEMA4AQ9H3S1 761 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 CXorf56Q9H5V9 222 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 AS3MTQ9HBK9 375 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 PDLIM7Q9NR12 457 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 WDR81Q562E7 1941 aa20.94■□□□□ 0.94
RCCD1-201ENST00000394258 ZNFX1Q9P2E3 1918 aaKnown RBP20.94■□□□□ 0.94
RCCD1-201ENST00000394258 GMNCA6NCL1 334 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 KIAA0754O94854 1291 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 SEZ6Q53EL9 994 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 ABHD15Q6UXT9 468 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 USP37Q86T82 979 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 C1orf54Q8WWF1 131 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 FNBP1Q96RU3 617 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 C1orf112Q9NSG2 853 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 H0YHG0 523 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 MAFGO15525 162 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 TRAPPC3O43617 180 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 CTNNA2P26232 953 aa20.93■□□□□ 0.94
RCCD1-201ENST00000394258 SLC29A2Q14542 456 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms