RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 SLC47A2Q86VL8 602 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 TMEM192Q8IY95 271 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 THNSL1Q8IYQ7 743 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 KIAA0319LQ8IZA0 1049 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 SHC3Q92529 594 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 NCK2O43639 380 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 MFAP3P55082 362 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 AMHR2Q16671 573 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 TRIM58Q8NG06 486 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 ANKRD7Q92527 254 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 AGPAT1Q99943 283 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 DAAM1Q9Y4D1 1078 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 COL1A2P08123 1366 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 ZNF185O15231 689 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 OGTO15294 1046 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 CAP1Q01518 475 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 TMEM62Q0P6H9 643 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 TMEM132AQ24JP5 1023 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 VPS36Q86VN1 386 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 BRSK2Q8IWQ3 736 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 TMEM130Q8N3G9 435 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 LMBR1Q8WVP7 490 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 CPB2Q96IY4 423 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 NOX5Q96PH1 765 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 CGRRF1Q99675 332 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 APBA2Q99767 749 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 SEPT11Q9NVA2 429 aaKnown RBP20.55■□□□□ 0.88
CLDND1-203ENST00000394181 CPSF3Q9UKF6 684 aaKnown RBP20.55■□□□□ 0.88
CLDND1-203ENST00000394181 GPR25O00155 361 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 CA12O43570 354 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 TBC1D8O95759 1140 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 TNFAIP3P21580 790 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 ZNF568Q3ZCX4 644 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 TAF3Q5VWG9 929 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 MPZL3Q6UWV2 235 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 NOP9Q86U38 636 aaKnown RBP20.55■□□□□ 0.88
CLDND1-203ENST00000394181 TRPV1Q8NER1 839 aa20.55■□□□□ 0.88
CLDND1-203ENST00000394181 APOBEC3GQ9HC16 384 aaKnown RBP20.55■□□□□ 0.88
CLDND1-203ENST00000394181 LUC7LQ9NQ29 371 aaKnown RBP20.55■□□□□ 0.88
CLDND1-203ENST00000394181 TMEM88BA6NKF7 163 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 PALMO75781 387 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 CHRNB2P17787 502 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 FGFR4P22455 802 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 ANXA13P27216 316 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 PIK3CAP42336 1068 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 PHKA2P46019 1235 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 GALCP54803 685 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 RNF10Q8N5U6 811 aaKnown RBP20.54■□□□□ 0.88
CLDND1-203ENST00000394181 NLRP7Q8WX94 980 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 PCDHB18PQ96TA0 734 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 NFKBIZQ9BYH8 718 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 CDT1Q9H211 546 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 NOCTQ9UK39 431 aaKnown RBP20.54■□□□□ 0.88
CLDND1-203ENST00000394181 GABRQQ9UN88 632 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 SAR1BQ9Y6B6 198 aa20.54■□□□□ 0.88
CLDND1-203ENST00000394181 AOC2O75106 756 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 F2P00734 622 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 CST3P01034 146 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-203ENST00000394181 SMIM10L2AP0DMW4 78 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 SMIM10L2BP0DMW5 78 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 TMOD1P28289 359 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 C10orf76Q5T2E6 689 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 RPUSD2Q8IZ73 545 aaKnown RBP20.53■□□□□ 0.88
CLDND1-203ENST00000394181 CAPZA3Q96KX2 299 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 PSMB7Q99436 277 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 FAM49AQ9H0Q0 323 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-203ENST00000394181 GOLPH3Q9H4A6 298 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 JRKLQ9Y4A0 524 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 UMODL1Q5DID0 1318 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 ZSWIM8A7E2V4 1837 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 MEFVO15553 781 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-203ENST00000394181 CCDC172P0C7W6 258 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 SRGAP1Q7Z6B7 1085 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 EPS8L1Q8TE68 723 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 SOCS4Q8WXH5 440 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 MTMR12Q9C0I1 747 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 CDHR5Q9HBB8 845 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 TNFSF13BQ9Y275 285 aa20.53■□□□□ 0.88
CLDND1-203ENST00000394181 EFCAB8A8MWE9 144 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 FTCDO95954 541 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 H2AFZP0C0S5 128 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 PSMC4P43686 418 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 ZNF200P98182 395 aaPredicted RBP20.52■□□□□ 0.88
CLDND1-203ENST00000394181 POU5F1BQ06416 359 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 KIZQ2M2Z5 673 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 NFRKBQ6P4R8 1299 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 H2AFVQ71UI9 128 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 TXLNBQ8N3L3 684 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 SMC1BQ8NDV3 1235 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 PRMT7Q9NVM4 692 aaPredicted RBP20.52■□□□□ 0.88
CLDND1-203ENST00000394181 MYH10P35580 1976 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 CEP350Q5VT06 3117 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 GRID2IPA4D2P6 1211 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 MYL3P08590 195 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 ARF4P18085 180 aaPredicted RBP20.52■□□□□ 0.88
CLDND1-203ENST00000394181 ABCB4P21439 1286 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 CXCR5P32302 372 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 RUFY4Q6ZNE9 571 aa20.52■□□□□ 0.88
CLDND1-203ENST00000394181 RSRC2Q7L4I2 434 aaKnown RBP20.52■□□□□ 0.88
CLDND1-203ENST00000394181 COG1Q8WTW3 980 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms