RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 CPA5Q8WXQ8 436 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 MAGEB18Q96M61 343 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 POLR3CQ9BUI4 534 aaPredicted RBP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 MYLK2Q9H1R3 596 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 NPHS2Q9NP85 383 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 TAF1P21675 1872 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 PI4K2BG5E9Z4 385 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 GOLGA8RI6L899 631 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 RFX1P22670 979 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 MMP14P50281 582 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 STAT4Q14765 748 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 SHROOM1Q2M3G4 852 aaPredicted RBP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 PRUNE1Q86TP1 453 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 TBC1D16Q8TBP0 767 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 DTX3LQ8TDB6 740 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 POMGNT1Q8WZA1 660 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 FNBP1Q96RU3 617 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 TMEM117Q9H0C3 514 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 CBX6O95503 412 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 GH2P01242 217 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 RALAP11233 206 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 TNNI1P19237 187 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 P3H1Q32P28 736 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 ZC3H18Q86VM9 953 aaKnown RBP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 CPXCR1Q8N123 301 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 AGGF1Q8N302 714 aaeCLIP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 WDR11Q9BZH6 1224 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 EPB41L4BQ9H329 900 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 EBF2Q9HAK2 575 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 C1orf112Q9NSG2 853 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 NINJ2Q9NZG7 142 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 ADAM22Q9P0K1 906 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 WHRNQ9P202 907 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 ZFATQ9P243 1243 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 BCORQ6W2J9 1755 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 NDUFB10O96000 172 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 MAGEA4P43358 317 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 CDR2Q01850 454 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 CAV1Q03135 178 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 PPP3CAQ08209 521 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 TRAF1Q13077 416 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 XKR9Q5GH70 373 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 SLCO1B3Q9NPD5 702 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 HOMER2Q9NSB8 354 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 SGK1O00141 431 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 SLITRK3O94933 977 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 HARSP12081 509 aaKnown RBP12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 EPHB2P29323 1055 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 DAB2IPQ5VWQ8 1189 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 CDC42EP5Q6NZY7 148 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 DCUN1D2Q6PH85 259 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 CEP128Q6ZU80 1094 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 ZBED8Q8IZ13 594 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 DHX38Q92620 1227 aaKnown RBP12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 TUFT1Q9NNX1 390 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 UVRAGQ9P2Y5 699 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 GTF3C4Q9UKN8 822 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 AGTPBP1Q9UPW5 1226 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 SLIT2O94813 1529 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 PLCH1Q4KWH8 1693 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 SLC26A4O43511 780 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 SREBF1P36956 1147 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 OVGP1Q12889 678 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 KIF22Q14807 665 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 TMEM154Q6P9G4 183 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 ANKMY2Q8IV38 441 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 ZNF570Q96NI8 536 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 KLF6Q99612 283 aaPredicted RBP12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 PI4K2AQ9BTU6 479 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 DBNDD1Q9H9R9 158 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 RAB20Q9NX57 234 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 POLLQ9UGP5 575 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 EXOC7Q9UPT5 735 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 PCDHA3Q9Y5H8 950 aa12.55□□□□□ -0.4
R3HDM2-203ENST00000393811 UNC5CO95185 931 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 BAG2O95816 211 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 SERPINB2P05120 415 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 SNHG28P0DPA3 235 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 MYCLP12524 364 aaPredicted RBP12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 DYNLT1P63172 113 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 GPS1Q13098 491 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 DNAJC9Q8WXX5 260 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 C8orf37Q96NL8 207 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 SH3GL3Q99963 347 aa12.54□□□□□ -0.4
R3HDM2-203ENST00000393811 TMOD2Q9NZR1 351 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms