RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PFKFB1P16118 471 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 AFMP43652 599 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 NDUFV1P49821 464 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 GTF2BQ00403 316 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 SOX4Q06945 474 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 COASYQ13057 564 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 HSP90AA2PQ14568 343 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 SMC1AQ14683 1233 aaKnown RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 COL19A1Q14993 1142 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 PTPN14Q15678 1187 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 DUSP6Q16828 381 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 CTC1Q2NKJ3 1217 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 ATL3Q6DD88 541 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 ZPBP2Q6X784 338 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 DDX53Q86TM3 631 aaKnown RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 MAP4K3Q8IVH8 894 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 FEZF2Q8TBJ5 459 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 ADAMTS19Q8TE59 1207 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 C18orf25Q96B23 403 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 SNX27Q96L92 541 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 CCDC94Q9BW85 323 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 GPR62Q9BZJ7 368 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 MRPL44Q9H9J2 332 aaKnown RBP8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 PANK4Q9NVE7 773 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 CLEC1BQ9P126 229 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 TUBGCP4Q9UGJ1 667 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 CDH22Q9UJ99 828 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 KCNH3Q9ULD8 1083 aa8.39□□□□□ -1.07
HMGB3P1-201ENST00000393368 SMIM28A0A1B0GU29 152 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 FRMD3A2A2Y4 597 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 H0YCG3 227 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 I3L4J1 428 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 DLL1O00548 723 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 CLDN3O15551 220 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 FAM189A1O60320 539 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 CLASP2O75122 1294 aaKnown RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 PPP1R37O75864 691 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 PRPF6O94906 941 aaKnown RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 THP07101 528 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 CTSAP10619 480 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 BMP1P13497 986 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 GAP43P17677 238 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 CLCNKBP51801 687 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 GUCY2FP51841 1108 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 YARSP54577 528 aaKnown RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 ASIC1P78348 528 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 MCL1Q07820 350 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 ADAM15Q13444 863 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 TUSC3Q13454 348 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 CUL4BQ13620 913 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 SLC10A6Q3KNW5 377 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 LEXMQ3ZCV2 418 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 PTCRAQ6ISU1 281 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 KANK3Q6NY19 840 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 ZNF720Q7Z2F6 126 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 APBB1IPQ7Z5R6 666 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 EFHBQ8N7U6 833 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 MRPL43Q8N983 215 aaKnown RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 IQUBQ8NA54 791 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 C3orf58Q8NDZ4 430 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 ZSWIM2Q8NEG5 633 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 RSPH1Q8WYR4 309 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 PPP2R3CQ969Q6 453 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 ACAP3Q96P50 834 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 PPP1R10Q96QC0 940 aaKnown RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 MSTO1Q9BUK6 570 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 TRIM9Q9C026 710 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 TNMDQ9H2S6 317 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 GOLPH3LQ9H4A5 285 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 NGRNQ9NPE2 291 aaKnown RBP8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 KBTBD4Q9NVX7 518 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 KCNG1Q9UIX4 513 aa8.38□□□□□ -1.07
HMGB3P1-201ENST00000393368 ZMYM2Q9UBW7 1377 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 C5orf42Q9H799 3197 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 MYO9BQ13459 2157 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 GRXCR2A6NFK2 248 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 ACTN4O43707 911 aaKnown RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 NR1I2O75469 434 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 TADA2AO75478 443 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 EFEMP2O95967 443 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 PIGRP01833 764 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 SOD2P04179 222 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 CNPP09543 421 aaKnown RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 EPCAMP16422 314 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 RPL17P18621 184 aaKnown RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 CMA1P23946 247 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 ACOT2P49753 483 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 NDUFA8P51970 172 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 ENOX2Q16206 610 aaKnown RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 AAK1Q2M2I8 961 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 RTP2Q5QGT7 225 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 L1TD1Q5T7N2 865 aaKnown RBP8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 ADALQ6DHV7 355 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 FUT10Q6P4F1 479 aa8.37□□□□□ -1.07
HMGB3P1-201ENST00000393368 PRSS55Q6UWB4 352 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms