RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CXCL16Q9H2A7 254 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 APOBEC3GQ9HC16 384 aaKnown RBP16.16■□□□□ 0.18
MKS1-202ENST00000393119 GPR25O00155 361 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 TOM1L1O75674 476 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 FTCDO95954 541 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 HLA-DRAP01903 254 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 CAPN2P17655 700 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 CETN1Q12798 172 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 DGKDQ16760 1214 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 ZNF484Q5JVG2 852 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 C15orf39Q6ZRI6 1047 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 ZBTB8OSQ8IWT0 167 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 KIAA0319LQ8IZA0 1049 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 SLC30A5Q8TAD4 765 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 LMBR1Q8WVP7 490 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 PCDHB18PQ96TA0 734 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 FZD8Q9H461 694 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 PJA2O43164 708 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 FERP16591 822 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 GPC3P51654 580 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 ATF7IP2Q5U623 682 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 RUFY4Q6ZNE9 571 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 ZNF662Q6ZS27 426 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 NOP9Q86U38 636 aaKnown RBP16.15■□□□□ 0.18
MKS1-202ENST00000393119 PTPRHQ9HD43 1115 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 NENFQ9UMX5 172 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 COQ4Q9Y3A0 265 aa16.15■□□□□ 0.18
MKS1-202ENST00000393119 N4BP1O75113 896 aaKnown RBP16.14■□□□□ 0.17
MKS1-202ENST00000393119 PALMO75781 387 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 AMHR2Q16671 573 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 NFRKBQ6P4R8 1299 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 MNS1Q8NEH6 495 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 NLRP7Q8WX94 980 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 MTMR12Q9C0I1 747 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 CDC23Q9UJX2 597 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 MYO6Q9UM54 1294 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 HYOU1Q9Y4L1 999 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 ACKR2O00590 384 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 P4HA2O15460 535 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 TADA3O75528 432 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 ZRANB2O95218 330 aaKnown RBP eCLIP16.14■□□□□ 0.17
MKS1-202ENST00000393119 MYL3P08590 195 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 CHRNB2P17787 502 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 PSMC4P43686 418 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 EFNA5P52803 228 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 MCCD1P59942 119 aaPredicted RBP16.14■□□□□ 0.17
MKS1-202ENST00000393119 BMS1Q14692 1282 aaKnown RBP16.14■□□□□ 0.17
MKS1-202ENST00000393119 NAB2Q15742 525 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 ZNF568Q3ZCX4 644 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 ZACNQ401N2 412 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 SLFN12LQ6IEE8 588 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 RPUSD2Q8IZ73 545 aaKnown RBP16.14■□□□□ 0.17
MKS1-202ENST00000393119 COG1Q8WTW3 980 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 OSGEPQ9NPF4 335 aa16.14■□□□□ 0.17
MKS1-202ENST00000393119 A6NJR5 290 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 PDE2AO00408 941 aaPredicted RBP16.13■□□□□ 0.17
MKS1-202ENST00000393119 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
MKS1-202ENST00000393119 MMEP08473 750 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 CFHP08603 1231 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 SMIM10L2AP0DMW4 78 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 SMIM10L2BP0DMW5 78 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 CXCL8P10145 99 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 PIK3CAP42336 1068 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 GALCP54803 685 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 HTRA3P83110 453 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 TEX35Q5T0J7 233 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 ZPBP2Q6X784 338 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 ARHGEF26Q96DR7 871 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 HINFPQ9BQA5 517 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 UBXN6Q9BZV1 441 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 CDT1Q9H211 546 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 MYO1AQ9UBC5 1043 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 TMEM88BA6NKF7 163 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 HOXC6P09630 235 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 KRT5P13647 590 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 CLDN10P78369 228 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 MRPS25P82663 173 aaKnown RBP16.13■□□□□ 0.17
MKS1-202ENST00000393119 KIF22Q14807 665 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 TRAPPC11Q7Z392 1133 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 EFCAB13Q8IY85 973 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 TRIB2Q92519 343 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 NT5C1BQ96P26 610 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 MMS19Q96T76 1030 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 AGPAT1Q99943 283 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
MKS1-202ENST00000393119 SLC5A4Q9NY91 659 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.13■□□□□ 0.17
MKS1-202ENST00000393119 NUB1Q9Y5A7 615 aa16.13■□□□□ 0.17
MKS1-202ENST00000393119 ATMINO43313 823 aaPredicted RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 PGK1P00558 417 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 HOXD8P13378 290 aaPredicted RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 ARF4P18085 180 aaPredicted RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 PROZP22891 400 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 RGS2P41220 211 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 PLA2G4AP47712 749 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 MCL1Q07820 350 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 C2CD6Q53TS8 623 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms