RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ST18O60284 1047 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 GJB2P29033 226 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 GBP2P32456 591 aaPredicted RBP18.24■□□□□ 0.51
PTPRK-208ENST00000392449 DCAF4L1Q3SXM0 396 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 RINT1Q6NUQ1 792 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 LILRA6Q6PI73 481 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 TMEM105Q8N8V8 129 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 MYADMQ96S97 322 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 CLSTN3Q9BQT9 956 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 TTPALQ9BTX7 342 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 NT5C3AQ9H0P0 336 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 CDT1Q9H211 546 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 KCNK12Q9HB15 430 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 WDR6Q9NNW5 1121 aaKnown RBP18.24■□□□□ 0.51
PTPRK-208ENST00000392449 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.24■□□□□ 0.51
PTPRK-208ENST00000392449 FNIP2Q9P278 1114 aa18.24■□□□□ 0.51
PTPRK-208ENST00000392449 I3L4J1 428 aa18.23■□□□□ 0.51
PTPRK-208ENST00000392449 NARSO43776 548 aaKnown RBP18.23■□□□□ 0.51
PTPRK-208ENST00000392449 PRPHP41219 470 aa18.23■□□□□ 0.51
PTPRK-208ENST00000392449 ATP2C1P98194 919 aaPredicted RBP18.23■□□□□ 0.51
PTPRK-208ENST00000392449 C1orf186Q6ZWK4 172 aa18.23■□□□□ 0.51
PTPRK-208ENST00000392449 LNX1Q8TBB1 728 aaPredicted RBP18.23■□□□□ 0.51
PTPRK-208ENST00000392449 PNMA5Q96PV4 448 aa18.23■□□□□ 0.51
PTPRK-208ENST00000392449 PPP1R10Q96QC0 940 aaKnown RBP18.23■□□□□ 0.51
PTPRK-208ENST00000392449 ACO2Q99798 780 aaKnown RBP18.23■□□□□ 0.51
PTPRK-208ENST00000392449 TARS2Q9BW92 718 aaKnown RBP18.23■□□□□ 0.51
PTPRK-208ENST00000392449 MYO15AQ9UKN7 3530 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 PHLPP2Q6ZVD8 1323 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 VWA3AA6NCI4 1184 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 LAD1O00515 517 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 SLC16A4O15374 487 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 CLCNKBP51801 687 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 PTPN5P54829 565 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 SOX4Q06945 474 aaPredicted RBP18.22■□□□□ 0.51
PTPRK-208ENST00000392449 PSMD5Q16401 504 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 ZNF568Q3ZCX4 644 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 CD300LGQ6UXG3 332 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 C3orf58Q8NDZ4 430 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 PLEKHA4Q9H4M7 779 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 PIDD1Q9HB75 910 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 KMT5AQ9NQR1 393 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 ARHGAP28Q9P2N2 729 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 TNFSF13BQ9Y275 285 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 MYH11P35749 1972 aa18.22■□□□□ 0.51
PTPRK-208ENST00000392449 NPHP3-ACAD11A0A0J9YXS1 232 aa18.21■□□□□ 0.51
PTPRK-208ENST00000392449 HARSP12081 509 aaKnown RBP18.21■□□□□ 0.51
PTPRK-208ENST00000392449 DMP1Q13316 513 aaPredicted RBP18.21■□□□□ 0.51
PTPRK-208ENST00000392449 TDGQ13569 410 aa18.21■□□□□ 0.51
PTPRK-208ENST00000392449 RILPL1Q5EBL4 403 aa18.21■□□□□ 0.51
PTPRK-208ENST00000392449 GET4Q7L5D6 327 aaPredicted RBP18.21■□□□□ 0.51
PTPRK-208ENST00000392449 PIK3R5Q8WYR1 880 aa18.21■□□□□ 0.51
PTPRK-208ENST00000392449 PTPRHQ9HD43 1115 aa18.21■□□□□ 0.51
PTPRK-208ENST00000392449 DPP7Q9UHL4 492 aa18.21■□□□□ 0.51
PTPRK-208ENST00000392449 FBXW11Q9UKB1 542 aa18.21■□□□□ 0.51
PTPRK-208ENST00000392449 H3BQV1 296 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 ABLIM1O14639 778 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 MEFVO15553 781 aaPredicted RBP18.2■□□□□ 0.5
PTPRK-208ENST00000392449 ZMYND10O75800 440 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 B3GAT3O94766 335 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 NTHL1P78549 312 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 SEZ6Q53EL9 994 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 ELMSAN1Q6PJG2 1045 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 RSPO2Q6UXX9 243 aaPredicted RBP18.2■□□□□ 0.5
PTPRK-208ENST00000392449 GPR65Q8IYL9 337 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 TMEM130Q8N3G9 435 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 HDAC7Q8WUI4 952 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 ZBTB45Q96K62 511 aaPredicted RBP18.2■□□□□ 0.5
PTPRK-208ENST00000392449 DRC1Q96MC2 740 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 ZMAT2Q96NC0 199 aaKnown RBP18.2■□□□□ 0.5
PTPRK-208ENST00000392449 PRKD2Q9BZL6 878 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 ZDHHC7Q9NXF8 308 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 KIF3AQ9Y496 699 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 STK24Q9Y6E0 443 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 SMIM28A0A1B0GU29 152 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 H0Y858 1186 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 TKTP29401 623 aaKnown RBP18.2■□□□□ 0.5
PTPRK-208ENST00000392449 GRM5P41594 1212 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 BRCC3P46736 316 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 CREMQ03060 361 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 UPP1Q16831 310 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 CWF19L1Q69YN2 538 aaKnown RBP18.2■□□□□ 0.5
PTPRK-208ENST00000392449 FLCNQ8NFG4 579 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 MRPL4Q9BYD3 311 aaKnown RBP18.2■□□□□ 0.5
PTPRK-208ENST00000392449 MFSD1Q9H3U5 465 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 TMEM134Q9H6X4 195 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 DUSP12Q9UNI6 340 aa18.2■□□□□ 0.5
PTPRK-208ENST00000392449 CACNA1HO95180 2353 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 CITO14578 2027 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 PAPLNO95428 1278 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 OR1D2P34982 312 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 HYIQ5T013 277 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 GRASPQ7Z6J2 395 aaPredicted RBP18.19■□□□□ 0.5
PTPRK-208ENST00000392449 LRRC15Q8TF66 581 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 STAMQ92783 540 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 CCDC94Q9BW85 323 aaPredicted RBP18.19■□□□□ 0.5
PTPRK-208ENST00000392449 RHOBTB2Q9BYZ6 727 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 ANKFY1Q9P2R3 1169 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 EPS15L1Q9UBC2 864 aa18.19■□□□□ 0.5
PTPRK-208ENST00000392449 CCL16O15467 120 aa18.18■□□□□ 0.5
PTPRK-208ENST00000392449 PI15O43692 258 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms