RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 UBE3AQ05086 875 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 GRIK3Q13003 919 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 STIM1Q13586 685 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 PAN2Q504Q3 1202 aaKnown RBP7.37□□□□□ -1.23
UBBP1-201ENST00000392399 EPC2Q52LR7 807 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 ARMCX5Q6P1M9 558 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 SLC39A4Q6P5W5 647 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 KCNT2Q6UVM3 1135 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 LRRC55Q6ZSA7 311 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 SLC9A9Q8IVB4 645 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 DEFB123Q8N688 67 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 TRIML1Q8N9V2 468 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 KIAA0895Q8NCT3 520 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 GLIS3Q8NEA6 775 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 GSTCDQ8NEC7 633 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 FBXO22Q8NEZ5 403 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 ZNF558Q96NG5 402 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 C11orf84Q9BUA3 381 aaPredicted RBP7.37□□□□□ -1.23
UBBP1-201ENST00000392399 APOL6Q9BWW8 343 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 FGFBP2Q9BYJ0 223 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 HAPLN2Q9GZV7 340 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 LMAN2LQ9H0V9 348 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 TTYH1Q9H313 450 aaPredicted RBP7.37□□□□□ -1.23
UBBP1-201ENST00000392399 NRDE2Q9H7Z3 1164 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 RPF1Q9H9Y2 349 aaKnown RBP7.37□□□□□ -1.23
UBBP1-201ENST00000392399 SLC38A7Q9NVC3 462 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 TBC1D13Q9NVG8 400 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 CNTN3Q9P232 1028 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 KIAA1468Q9P260 1216 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 PUF60Q9UHX1 559 aaKnown RBP7.37□□□□□ -1.23
UBBP1-201ENST00000392399 CPSF3Q9UKF6 684 aaKnown RBP7.37□□□□□ -1.23
UBBP1-201ENST00000392399 INPP5FQ9Y2H2 1132 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 GDAQ9Y2T3 454 aa7.37□□□□□ -1.23
UBBP1-201ENST00000392399 MRPL42Q9Y6G3 142 aaKnown RBP7.37□□□□□ -1.23
UBBP1-201ENST00000392399 SMIM28A0A1B0GU29 152 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 TTC26A0AVF1 554 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 ZNF233A6NK53 670 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 RBAK-RBAKDNI3L0D1 243 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 CALUO43852 315 aaPredicted RBP7.36□□□□□ -1.23
UBBP1-201ENST00000392399 EXTL3O43909 919 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 FAM189A1O60320 539 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 IL18RAPO95256 599 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 POMCP01189 267 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 GALTP07902 379 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 HARSP12081 509 aaKnown RBP7.36□□□□□ -1.23
UBBP1-201ENST00000392399 POU3F3P20264 500 aaPredicted RBP7.36□□□□□ -1.23
UBBP1-201ENST00000392399 CYP3A5P20815 502 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 PAX3P23760 479 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 RPL13P26373 211 aaKnown RBP7.36□□□□□ -1.23
UBBP1-201ENST00000392399 MCM4P33991 863 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 CTNNB1P35222 781 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 HOXD13P35453 343 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 GATMP50440 423 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 SCNN1GP51170 649 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 AFF1P51825 1210 aaKnown RBP7.36□□□□□ -1.23
UBBP1-201ENST00000392399 BCAR1P56945 870 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 OSTNP61366 133 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 PLCB3Q01970 1234 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 PPP2R3AQ06190 1150 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 DSC1Q08554 894 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 TUSC3Q13454 348 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 SURF1Q15526 300 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 NFIL3Q16649 462 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 SLC10A6Q3KNW5 377 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 FOXR2Q6PJQ5 311 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 NT5DC4Q86YG4 428 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 NELFCDQ8IXH7 590 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 GPD1LQ8N335 351 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 CEP120Q8N960 986 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 XXYLT1Q8NBI6 393 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 COLGALT1Q8NBJ5 622 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 ARNTL2Q8WYA1 636 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 DDX27Q96GQ7 796 aaKnown RBP7.36□□□□□ -1.23
UBBP1-201ENST00000392399 SNX27Q96L92 541 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 FBXL18Q96ME1 805 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 ZFP42Q96MM3 310 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 UROC1Q96N76 676 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 GAS2L1Q99501 681 aaPredicted RBP7.36□□□□□ -1.23
UBBP1-201ENST00000392399 C17orf80Q9BSJ5 609 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 NUP62CLQ9H1M0 184 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 KCTD10Q9H3F6 313 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 CLSTN2Q9H4D0 955 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 AGPAT3Q9NRZ7 376 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 MIOSQ9NXC5 875 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 MTMR10Q9NXD2 777 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 SPG21Q9NZD8 308 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 KLK14Q9P0G3 267 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 TRAF3IP3Q9Y228 551 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 LZTS1Q9Y250 596 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 FAN1Q9Y2M0 1017 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 DERAQ9Y315 318 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 CDH23Q9H251 3354 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 PTPRSQ13332 1948 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 MYO9BQ13459 2157 aa7.36□□□□□ -1.23
UBBP1-201ENST00000392399 FNDC1Q4ZHG4 1894 aaPredicted RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 PTGESO14684 152 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 NRP1O14786 923 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 PSMA7O14818 248 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 ZC3H11AO75152 810 aaKnown RBP eCLIP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 FGF18O76093 207 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms