RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TFDP2Q14188 446 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 NAALADL2Q58DX5 795 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 USP38Q8NB14 1042 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 C3orf20Q8ND61 904 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 ASZ1Q8WWH4 475 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 OMA1Q96E52 524 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 SLC12A6Q9UHW9 1150 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 EIF3EP60228 445 aaKnown RBP17.02■□□□□ 0.32
SHANK1-204ENST00000391814 TJAP1Q5JTD0 557 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 ARMCX6Q7L4S7 300 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 IFT43Q96FT9 208 aa17.02■□□□□ 0.32
SHANK1-204ENST00000391814 POTEB3A0JP26 581 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 POTECB2RU33 542 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 SLC29A2Q14542 456 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 POTEBQ6S5H4 581 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 ROPN1BQ9BZX4 212 aaPredicted RBP17.02■□□□□ 0.31
SHANK1-204ENST00000391814 ROPN1Q9HAT0 212 aaPredicted RBP17.02■□□□□ 0.31
SHANK1-204ENST00000391814 AS3MTQ9HBK9 375 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 BCS1LQ9Y276 419 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 SMNDC1O75940 238 aaKnown RBP eCLIP17.02■□□□□ 0.31
SHANK1-204ENST00000391814 GYPCP04921 128 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 PHKG2P15735 406 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 STAT3P40763 770 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 TTC39BQ5VTQ0 682 aaPredicted RBP17.02■□□□□ 0.31
SHANK1-204ENST00000391814 IZUMO2Q6UXV1 221 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 LUZP2Q86TE4 346 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 KLHL4Q9C0H6 718 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 NDEL1Q9GZM8 345 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 HSPBP1Q9NZL4 362 aa17.02■□□□□ 0.31
SHANK1-204ENST00000391814 ITGA8P53708 1063 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 DPYDQ12882 1025 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 SLC18A3Q16572 532 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 PLEKHA7Q6IQ23 1121 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 KCNN4O15554 427 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 METTL23Q86XA0 190 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 FAM162AQ96A26 154 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 FAM213AQ9BRX8 229 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 DAPK2Q9UIK4 370 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 KIAA0556O60303 1618 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 LMTK3Q96Q04 1460 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 PVALEFA0A1B0GWK0 134 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 CDH16O75309 829 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 CLK1P49759 484 aaKnown RBP17.01■□□□□ 0.31
SHANK1-204ENST00000391814 UBAP1Q9NZ09 502 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 CDV3Q9UKY7 258 aaKnown RBP17.01■□□□□ 0.31
SHANK1-204ENST00000391814 NMT2O60551 498 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 SRGAP2CP0DJJ0 459 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 KCNA2P16389 499 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 GPR162Q16538 588 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 SHCBP1LQ9BZQ2 653 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 BLOC1S6Q9UL45 172 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 MROH7-TTC4A0A0A0MT08 1334 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 PFASO15067 1338 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 ZNF200P98182 395 aaPredicted RBP17.01■□□□□ 0.31
SHANK1-204ENST00000391814 GLMNQ92990 594 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 ZBED2Q9BTP6 218 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 BBS2Q9BXC9 721 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 ZNF804BA4D1E1 1349 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 M0QYV0 167 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 APOL1O14791 398 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 KRT72Q14CN4 511 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 WLSQ5T9L3 541 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 CDKL3Q8IVW4 592 aaPredicted RBP17.01■□□□□ 0.31
SHANK1-204ENST00000391814 SUGP1Q8IWZ8 645 aaKnown RBP17.01■□□□□ 0.31
SHANK1-204ENST00000391814 MB21D2Q8IYB1 491 aaPredicted RBP17.01■□□□□ 0.31
SHANK1-204ENST00000391814 MAGEB18Q96M61 343 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 STMN3Q9NZ72 180 aa17.01■□□□□ 0.31
SHANK1-204ENST00000391814 DDX20Q9UHI6 824 aaKnown RBP17.01■□□□□ 0.31
SHANK1-204ENST00000391814 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 ABCD1P33897 745 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 RAB14P61106 215 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
SHANK1-204ENST00000391814 LRRN4CLQ8ND94 238 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 CASS4Q9NQ75 786 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 MAD2L2Q9UI95 211 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 UTYO14607 1347 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 CCDC60Q8IWA6 550 aaPredicted RBP17■□□□□ 0.31
SHANK1-204ENST00000391814 PARVAQ9NVD7 372 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 ADD3Q9UEY8 706 aaKnown RBP17■□□□□ 0.31
SHANK1-204ENST00000391814 CYP26A1O43174 497 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 ATP9BO43861 1147 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 DIABLOQ9NR28 239 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 SLC16A4O15374 487 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 PSMC3P17980 439 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 GRK2P25098 689 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 NAB2Q15742 525 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 FAM98CQ17RN3 349 aaKnown RBP17■□□□□ 0.31
SHANK1-204ENST00000391814 TMEM35BQ8NCS4 154 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 SLC30A5Q8TAD4 765 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 DDX18Q9NVP1 670 aaKnown RBP17■□□□□ 0.31
SHANK1-204ENST00000391814 ARIH1Q9Y4X5 557 aaPredicted RBP17■□□□□ 0.31
SHANK1-204ENST00000391814 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 KDM6BO15054 1643 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 USP1O94782 785 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 TRIM49P0CI25 452 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 TRIM49CP0CI26 452 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 OASLQ15646 514 aaKnown RBP17■□□□□ 0.31
SHANK1-204ENST00000391814 OR6B3Q8NGW1 331 aa17■□□□□ 0.31
SHANK1-204ENST00000391814 CNDP1Q96KN2 507 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms