RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 MRPL4Q9BYD3 311 aaKnown RBP2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 BHMT2Q9H2M3 363 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 TOMM22Q9NS69 142 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 H2AFY2Q9P0M6 372 aaPredicted RBP2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 B4GALT6Q9UBX8 382 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 USP25Q9UHP3 1055 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 ADAM21Q9UKJ8 722 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 DMTF1Q9Y222 760 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 CCDC187A0A096LP49 1063 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 CXorf49A8MYA2 514 aaPredicted RBP2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 PEX1O43933 1283 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 PRAMEF4O60810 478 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 TMEM127O75204 238 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 PRSS23O95084 383 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 LTA4HP09960 611 aaKnown RBP2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 VAV2P52735 878 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 MAPK10P53779 464 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 CLRN1P58418 232 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 HSD11B2P80365 405 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 RAPGEF1Q13905 1077 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 LLGL1Q15334 1064 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 C19orf54Q5BKX5 351 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZC3H12BQ5HYM0 836 aaKnown RBP2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 PEG10Q86TG7 708 aaKnown RBP2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 SAMD14Q8IZD0 417 aaPredicted RBP2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 ADAMTS15Q8TE58 950 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 SSH3Q8TE77 659 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 FUBP3Q96I24 572 aaKnown RBP eCLIP2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 CABP5Q9NP86 173 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 OXSMQ9NWU1 459 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 GPRC5DQ9NZD1 345 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 KCNE5Q9UJ90 142 aa2.35□□□□□ -2.03
RNU6-239P-201ENST00000390990 KAT6AQ92794 2004 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 INSIG1O15503 277 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 PJA2O43164 708 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 ADCY6O43306 1168 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 NRP2O60462 931 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 GPANK1O95872 356 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 XPAP23025 273 aaPredicted RBP2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 CANXP27824 592 aaKnown RBP2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 SREBF1P36956 1147 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 RANGAP1P46060 587 aaPredicted RBP2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 GPR15P49685 360 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 FLT3LGP49771 235 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 GRM1Q13255 1194 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZNF460Q14592 562 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 FAM47AQ5JRC9 791 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 KAZNQ674X7 775 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 SLC9A4Q6AI14 798 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 DLK2Q6UY11 383 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 THNSL2Q86YJ6 484 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 LYSMD2Q8IV50 215 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZZZ3Q8IYH5 903 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 REPS2Q8NFH8 660 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 SEMA6DQ8NFY4 1073 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 SNX33Q8WV41 574 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 RNPEPQ9H4A4 650 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 EVLQ9UI08 416 aaPredicted RBP2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 TMPRSS11EQ9UL52 423 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 WNT6Q9Y6F9 365 aa2.34□□□□□ -2.03
RNU6-239P-201ENST00000390990 PRSS38A1L453 326 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 LCHNA4D1U4 455 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 LINC01548A6NM66 108 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 CBX4O00257 560 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 YY2O15391 372 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 LATS1O95835 1130 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 GASTP01350 101 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 SNHG28P0DPA3 235 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 CCKARP32238 428 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 IGFALSP35858 605 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 GRIA3P42263 894 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 NRG3P56975 720 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 RAP2BP61225 183 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 PPARAQ07869 468 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 SLC10A2Q12908 348 aaPredicted RBP2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 SF3B3Q15393 1217 aaKnown RBP2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 GEN1Q17RS7 908 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 TMEM119Q4V9L6 283 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 CCDC178Q5BJE1 867 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 MORN5Q5VZ52 161 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 ESPNLQ6ZVH7 1005 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 PDZD4Q76G19 769 aaPredicted RBP2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 SLC41A1Q8IVJ1 513 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 SLC43A3Q8NBI5 491 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 TFAP2BQ92481 460 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 CLUHP3Q96NS8 147 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 REXO4Q9GZR2 422 aaKnown RBP2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 PRDM12Q9H4Q4 367 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 MSRAQ9UJ68 235 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 TBC1D30Q9Y2I9 924 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 SIK3Q9Y2K2 1263 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 ATRNL1Q5VV63 1379 aa2.33□□□□□ -2.04
RNU6-239P-201ENST00000390990 ST20-MTHFSA0A0A6YYL1 179 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 PPEF2O14830 753 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 RAPGEF3O95398 923 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 SNRPA1P09661 255 aaKnown RBP2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 KRT10P13645 584 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 ATP2A2P16615 1042 aaKnown RBP2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 GCSHP23434 173 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 SLC6A2P23975 617 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms