RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 NUP62CLQ9H1M0 184 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 MS4A5Q9H3V2 200 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 TLR7Q9NYK1 1049 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 LRP2BPQ9P2M1 347 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 VPS28Q9UK41 221 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 PRDM4Q9UKN5 801 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 PCOLCE2Q9UKZ9 415 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 FFAR2O15552 330 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 EGFRP00533 1210 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 HMOX1P09601 288 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 THEGLP0DJG4 465 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 PORP16435 677 aaPredicted RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ALAS2P22557 587 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 MC4RP32245 332 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 POLD2P49005 469 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 SH3BGRP55822 239 aaPredicted RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 SPEM2Q0P670 501 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 CCINQ13939 588 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ERV3-1Q14264 604 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 MYBPC3Q14896 1274 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ANKDD1AQ495B1 522 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 BTNL9Q6UXG8 535 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 USP51Q70EK9 711 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 KRT74Q7RTS7 529 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ZER1Q7Z7L7 766 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 PPFIBP1Q86W92 1011 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 AMIGO3Q86WK7 504 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 AVL9Q8NBF6 648 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 OR10H5Q8NGA6 315 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 DDX54Q8TDD1 881 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 HERVK_113Q902F9 699 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ZNF75CPQ92670 426 aaPredicted RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 KIF1BPQ96EK5 621 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ORC3Q9UBD5 711 aaPredicted RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 C2CD2Q9Y426 696 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 FLT1P17948 1338 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 MAPK8IP3Q9UPT6 1336 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 ANKRD26Q9UPS8 1709 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 C2orf81A6NN90 581 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 SFTPCP11686 197 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 EDN3P14138 238 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 TSHRP16473 764 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 HDCP19113 662 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 HSPA4P34932 840 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 TECP42680 631 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 TGFB2P61812 414 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 C17orf67Q0P5P2 114 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 FAPQ12884 760 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 SMAD4Q13485 552 aaKnown RBP6.3□□□□□ -1.4
ERCC4-202ENST00000389138 STARD3Q14849 445 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 RRS1Q15050 365 aaKnown RBP6.3□□□□□ -1.4
ERCC4-202ENST00000389138 DENND1CQ8IV53 801 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 SYTL1Q8IYJ3 562 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 CCDC170Q8IYT3 715 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 GOLGA6L1Q8N7Z2 621 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 Q8NFD4 153 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 TDRD7Q8NHU6 1098 aaKnown RBP6.3□□□□□ -1.4
ERCC4-202ENST00000389138 NEK9Q8TD19 979 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 PPP1R14AQ96A00 147 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 PRDM5Q9NQX1 630 aaPredicted RBP6.3□□□□□ -1.4
ERCC4-202ENST00000389138 HECAQ9UBI9 543 aaPredicted RBP6.3□□□□□ -1.4
ERCC4-202ENST00000389138 ITM2BQ9Y287 266 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 ZFP37Q9Y6Q3 630 aaPredicted RBP6.3□□□□□ -1.4
ERCC4-202ENST00000389138 THSD7BQ9C0I4 1608 aa6.3□□□□□ -1.4
ERCC4-202ENST00000389138 CCDC66A2RUB6 948 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 PI4KAP2A4QPH2 592 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 WDR64B1ANS9 1081 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 C2CD2LO14523 706 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 KLHL41O60662 606 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SOAT2O75908 522 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 GZMAP12544 262 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SKILP12757 684 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 XBP1P17861 261 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 IL11P20809 199 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ATP5F1P24539 256 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 KCNB1Q14721 858 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ZNF468Q5VIY5 522 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 APOA5Q6Q788 366 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 NLRC3Q7RTR2 1065 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 IL17RDQ8NFM7 739 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 BRSK1Q8TDC3 778 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 LMBR1Q8WVP7 490 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 RUFY2Q8WXA3 655 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SLC5A5Q92911 643 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 C1orf74Q96LT6 269 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SLC2A13Q96QE2 648 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 HHIPQ96QV1 700 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 C2orf40Q9H1Z8 148 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 TTC21BQ7Z4L5 1316 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 COL3A1P02461 1466 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 COL5A3P25940 1745 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 A0A0G2JLW4 131 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 AKR1B15C9JRZ8 316 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 CAPN9O14815 690 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 GAS7O60861 476 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SIN3BO75182 1162 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 XYLBO75191 536 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms