RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
KCNQ3-201ENST00000388996 APPL2Q8NEU8 664 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 PMS2P54278 862 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 PDXDC1Q6P996 788 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 RAPGEF5Q92565 580 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 EML4Q9HC35 981 aaKnown RBP13□□□□□ -0.33
KCNQ3-201ENST00000388996 ZNRF3Q9ULT6 936 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 CCDC88AQ3V6T2 1871 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 KCNB1Q14721 858 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 LDHDQ86WU2 507 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 NUDCD3Q8IVD9 361 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 DCUN1D1Q96GG9 259 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 FLT1P17948 1338 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 RPSAP08865 295 aaKnown RBP13□□□□□ -0.33
KCNQ3-201ENST00000388996 GRIK1P39086 918 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 KCNJ6P48051 423 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 NBPF9Q3BBW0 867 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 BEND6Q5SZJ8 279 aaPredicted RBP13□□□□□ -0.33
KCNQ3-201ENST00000388996 THEMIS2Q5TEJ8 643 aa13□□□□□ -0.33
KCNQ3-201ENST00000388996 ZNF609O15014 1411 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 EYA4O95677 639 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 SMAD1Q15797 465 aaKnown RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 ANKRD40Q6AI12 368 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 PPP2R3CQ969Q6 453 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 NEUROG2Q9H2A3 272 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 SPATS2LQ9NUQ6 558 aaKnown RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 PIN4Q9Y237 131 aaKnown RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 AP1ARQ63HQ0 302 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 SIK2Q9H0K1 926 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 DYRK4Q9NR20 520 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 ARSEP51690 589 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 DCTN4Q9UJW0 460 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 CDC42EP1Q00587 391 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 HIBCHQ6NVY1 386 aaPredicted RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 RNF135Q8IUD6 432 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 PRDM5Q9NQX1 630 aaPredicted RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 TSR3Q9UJK0 312 aaKnown RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 CTIFO43310 598 aaKnown RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 CPB1P15086 417 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 PDIA5Q14554 519 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 HAUS6Q7Z4H7 955 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 EFHBQ8N7U6 833 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 RMDN1Q96DB5 314 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 SENP1Q9P0U3 644 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 NFIXQ14938 502 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 EMC2Q15006 297 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 FAM47EQ6ZV65 393 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 OR9Q1Q8NGQ5 310 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 GTF3C2Q8WUA4 911 aaPredicted RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 ELAC2Q9BQ52 826 aaKnown RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 ESYT3A0FGR9 886 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 MOCS2O96007 188 aaPredicted RBP12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 FAM187AA6NFU0 413 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 KRT14P02533 472 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 NCOA4Q13772 614 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 DCAF4L1Q3SXM0 396 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 IZUMO3Q5VZ72 239 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 C16orf87Q6PH81 154 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
KCNQ3-201ENST00000388996 NPHP3-ACAD11A0A0J9YXS1 232 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 DGAT1O75907 488 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 CCDC137Q6PK04 289 aaKnown RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 NUDT18Q6ZVK8 323 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 TSPAN17Q96FV3 270 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 AFF4Q9UHB7 1163 aaKnown RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 GLYCTKQ8IVS8 523 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 ISCA1Q9BUE6 129 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 PCDHB8Q9UN66 801 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 PRPF4O43172 522 aaKnown RBP eCLIP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 HAUS5O94927 633 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 TXNP10599 105 aaKnown RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 KCNA2P16389 499 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 SPATA2LQ8IUW3 424 aaPredicted RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 YAF2Q8IY57 180 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 ASAP3Q8TDY4 903 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 DDX47Q9H0S4 455 aaKnown RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 STAT5BP51692 787 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 ZNF543Q08ER8 600 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 DHX34Q14147 1143 aaKnown RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 SYDE1Q6ZW31 735 aaPredicted RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 ALDH8A1Q9H2A2 487 aaPredicted RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 H0Y3Z8 333 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 SSTR3P32745 418 aaPredicted RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 TAGAPQ8N103 731 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 ATP6V1G3Q96LB4 118 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 SNAP23O00161 211 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 GNL1P36915 607 aaPredicted RBP12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 TMED1Q13445 227 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 TSSK1BQ9BXA7 367 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 TRABDQ9H4I3 376 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 CFAP69A5D8W1 941 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 LAMB3Q13751 1172 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 KLHL11Q9NVR0 708 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 TTC26A0AVF1 554 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 SLC1A1P43005 524 aa12.98□□□□□ -0.33
KCNQ3-201ENST00000388996 LMBRD2Q68DH5 695 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms