RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 KANK3Q6NY19 840 aa14.28□□□□□ -0.12
RPAIN-202ENST00000381208 RTL10Q7L3V2 364 aa14.28□□□□□ -0.12
RPAIN-202ENST00000381208 PIK3R5Q8WYR1 880 aa14.28□□□□□ -0.12
RPAIN-202ENST00000381208 MRPL4Q9BYD3 311 aaKnown RBP14.28□□□□□ -0.12
RPAIN-202ENST00000381208 NT5C3AQ9H0P0 336 aa14.28□□□□□ -0.12
RPAIN-202ENST00000381208 PIDD1Q9HB75 910 aa14.28□□□□□ -0.12
RPAIN-202ENST00000381208 TDRD15B5MCY1 1934 aaKnown RBP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 CASTOR2A6NHX0 329 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 H3BQV1 296 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 TMEM189-UBE2V1I3L0A0 370 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 PTGESO14684 152 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 SLC26A4O43511 780 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 TGM5O43548 720 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 TRAPPC3O43617 180 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 PEX3P56589 373 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 TDGQ13569 410 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 NBR1Q14596 966 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 ARL6IP4Q66PJ3 421 aaKnown RBP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 MCTP1Q6DN14 999 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 LILRA6Q6PI73 481 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 ALYREFQ86V81 257 aaKnown RBP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 SMG7Q92540 1137 aaKnown RBP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 CCDC94Q9BW85 323 aaPredicted RBP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 KCND2Q9NZV8 630 aa14.27□□□□□ -0.12
RPAIN-202ENST00000381208 ZFP37Q9Y6Q3 630 aaPredicted RBP14.27□□□□□ -0.12
RPAIN-202ENST00000381208 CLUHO75153 1309 aa14.27□□□□□ -0.13
RPAIN-202ENST00000381208 CCDC169A6NNP5 214 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 F8W810 466 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 ASGR2P07307 311 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 HNRNPA1P09651 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
RPAIN-202ENST00000381208 GUCY2CP25092 1073 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 NPTX2P47972 431 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 MRE11P49959 708 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 SMTNP53814 917 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 ATP2C1P98194 919 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-202ENST00000381208 PLCB2Q00722 1185 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 NT5DC1Q5TFE4 455 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 LIN9Q5TKA1 542 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 FAM171A1Q5VUB5 890 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 EEF1DP3Q658K8 133 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 DCLRE1AQ6PJP8 1040 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 PALB2Q86YC2 1186 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 PRSS33Q8NF86 280 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 DDX27Q96GQ7 796 aaKnown RBP14.26□□□□□ -0.13
RPAIN-202ENST00000381208 TMX3Q96JJ7 454 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 KIFC3Q9BVG8 833 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 PRKD2Q9BZL6 878 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 MFSD1Q9H3U5 465 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 KMT5AQ9NQR1 393 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 SLC38A7Q9NVC3 462 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 ARHGAP28Q9P2N2 729 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 EPS15L1Q9UBC2 864 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 DUSP12Q9UNI6 340 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 GDAQ9Y2T3 454 aa14.26□□□□□ -0.13
RPAIN-202ENST00000381208 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-202ENST00000381208 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-202ENST00000381208 H0YCG3 227 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 HIP1RO75146 1068 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 RFPL2O75678 378 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 ZMYND10O75800 440 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 B3GAT3O94766 335 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 KIF4AO95239 1232 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 BMP15O95972 392 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 SCP2P22307 547 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 HOXA9P31269 272 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 GBP2P32456 591 aaPredicted RBP14.25□□□□□ -0.13
RPAIN-202ENST00000381208 GRM5P41594 1212 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 CLCN5P51795 746 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 NAB2Q15742 525 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 PSMD5Q16401 504 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 ZNF568Q3ZCX4 644 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 HYIQ5T013 277 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 RINT1Q6NUQ1 792 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 C1orf186Q6ZWK4 172 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 SPIRE2Q8WWL2 714 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 AK8Q96MA6 479 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 ACO2Q99798 780 aaKnown RBP14.25□□□□□ -0.13
RPAIN-202ENST00000381208 NTPCRQ9BSD7 190 aaKnown RBP14.25□□□□□ -0.13
RPAIN-202ENST00000381208 KCNK12Q9HB15 430 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.25□□□□□ -0.13
RPAIN-202ENST00000381208 FBXW11Q9UKB1 542 aa14.25□□□□□ -0.13
RPAIN-202ENST00000381208 E9PMD0 336 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 POU2F2P09086 479 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 MCF2P10911 925 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 VCPP55072 806 aaKnown RBP14.24□□□□□ -0.13
RPAIN-202ENST00000381208 TCF15Q12870 199 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 STRN3Q13033 797 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 UVSSAQ2YD98 709 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 XKR4Q5GH76 650 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 RTP2Q5QGT7 225 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 CEP57Q86XR8 500 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 LNX1Q8TBB1 728 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-202ENST00000381208 ZNF707Q96C28 371 aaPredicted RBP14.24□□□□□ -0.13
RPAIN-202ENST00000381208 PPP1R10Q96QC0 940 aaKnown RBP14.24□□□□□ -0.13
RPAIN-202ENST00000381208 PAAF1Q9BRP4 392 aa14.24□□□□□ -0.13
RPAIN-202ENST00000381208 TCHPQ9BT92 498 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms