RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 TTC1Q99614 292 aa11.89□□□□□ -0.51
NPC1L1-202ENST00000381160 RTN3O95197 1032 aaPredicted RBP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 KPNB1Q14974 876 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 BORCS6Q96GS4 357 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 CRAMP1Q96RY5 1269 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 EMSYQ7Z589 1322 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 MYO3BQ8WXR4 1341 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 USP54Q70EL1 1684 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 HAUS5O94927 633 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 ESRRAP11474 423 aaPredicted RBP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 CCNB1P14635 433 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 AKR1B1P15121 316 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 SIK1P57059 783 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 MDH1BQ5I0G3 518 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 ASAP3Q8TDY4 903 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 GRK7Q8WTQ7 553 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 SLC16A3O15427 465 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 GGPS1O95749 300 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 LMNAP02545 664 aaKnown RBP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 ZBTB48P10074 688 aaPredicted RBP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 PIK3CAP42336 1068 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 C6orf163Q5TEZ5 329 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 CGB2Q6NT52 195 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 GALNT15Q8N3T1 639 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 SLC5A5Q92911 643 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 KAT5Q92993 513 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 FAM161BQ96MY7 647 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 TMEM109Q9BVC6 243 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 LRRC42Q9Y546 428 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 TXNDC9O14530 226 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 SGPL1O95470 568 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 CETPP11597 493 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 UBXN2AP68543 259 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 EZH1Q92800 747 aaPredicted RBP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 RIOX1Q9H6W3 641 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 SERPINA10Q9UK55 444 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 ZNF148Q9UQR1 794 aa11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.88□□□□□ -0.51
NPC1L1-202ENST00000381160 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 hCG_1984214I3L0E3 225 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 WFS1O76024 890 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ATF7P17544 494 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 CTNNA2P26232 953 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 SKIV2L2P42285 1042 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 USP4Q13107 963 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 THOC5Q13769 683 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 EPC2Q52LR7 807 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 PHLDB3Q6NSJ2 640 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 LVRNQ6Q4G3 990 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ZNF713Q8N859 430 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 HAUS1Q96CS2 278 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ANKRD27Q96NW4 1050 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 PARVGQ9HBI0 331 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ZBTB21Q9ULJ3 1066 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 LRCH1Q9Y2L9 728 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 PARP4Q9UKK3 1724 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 GOLGA8IPA6NC78 632 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 GOLGA8JA6NMD2 632 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ZBTB39O15060 712 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ETS2P15036 469 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 TAL1P17542 331 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 PTPN4P29074 926 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 HOXD13P35453 343 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 WDR4P57081 412 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ARHGAP4P98171 946 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 PARP6Q2NL67 630 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 INTS5Q6P9B9 1019 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 DSTYKQ6XUX3 929 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 MAIP1Q8WWC4 291 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 KLHL11Q9NVR0 708 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 MYH3P11055 1940 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 BHMG1C9JSJ3 638 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ZBTB5O15062 677 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ACADSP16219 412 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 GNAZP19086 355 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 RPA3P35244 121 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 PKN2Q16513 984 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 IRGCQ6NXR0 463 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 ZNF804AQ7Z570 1209 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 SYT2Q8N9I0 419 aaPredicted RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 CFAP57Q96MR6 1250 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 NAP1L4Q99733 375 aaKnown RBP11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 GORASP1Q9BQQ3 440 aa11.87□□□□□ -0.51
NPC1L1-202ENST00000381160 K7ENM7 598 aa11.86□□□□□ -0.51
NPC1L1-202ENST00000381160 NPTXRO95502 500 aa11.86□□□□□ -0.51
NPC1L1-202ENST00000381160 MAGEA4P43358 317 aa11.86□□□□□ -0.51
NPC1L1-202ENST00000381160 STAT4Q14765 748 aa11.86□□□□□ -0.51
NPC1L1-202ENST00000381160 P3H1Q32P28 736 aa11.86□□□□□ -0.51
NPC1L1-202ENST00000381160 WASHC2DQ5SRD0 308 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms