RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 PTGISQ16647 500 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 TDRD10Q5VZ19 366 aaKnown RBP8.65□□□□□ -1.02
ERCC8-202ENST00000381118 LHX8Q68G74 356 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 OR5B17Q8NGF7 314 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 CCDC42Q96M95 316 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 ADPGKQ9BRR6 497 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 EDEM3Q9BZQ6 932 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 MTMR12Q9C0I1 747 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 LZTFL1Q9NQ48 299 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 TRMT13Q9NUP7 481 aaKnown RBP8.65□□□□□ -1.02
ERCC8-202ENST00000381118 TFR2Q9UP52 801 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 EPN1Q9Y6I3 576 aaPredicted RBP8.65□□□□□ -1.02
ERCC8-202ENST00000381118 A0A1B0GUA9 196 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 FAM170AA1A519 330 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 M0QZ92 97 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 ZSCAN12O43309 604 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 GFPT2O94808 682 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 NPTXRO95502 500 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 STAG3L1P0CL83 205 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 HNRNPH3P31942 346 aaKnown RBP8.65□□□□□ -1.03
ERCC8-202ENST00000381118 EIF4A3P38919 411 aaKnown RBP8.65□□□□□ -1.03
ERCC8-202ENST00000381118 PIK3CAP42336 1068 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 PRMT2P55345 433 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 NKX3-2P78367 333 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 TFAMQ00059 246 aaKnown RBP8.65□□□□□ -1.03
ERCC8-202ENST00000381118 CDC42EP1Q00587 391 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 CYP27A1Q02318 531 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 DRAP1Q14919 205 aaPredicted RBP8.65□□□□□ -1.03
ERCC8-202ENST00000381118 ASIC2Q16515 512 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 SLC9C1Q4G0N8 1177 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 SCARA3Q6AZY7 606 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 TAF2Q6P1X5 1199 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 TMEM130Q8N3G9 435 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 KAT5Q92993 513 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 GLT1D1Q96MS3 346 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 CGRRF1Q99675 332 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 NUCKS1Q9H1E3 243 aaKnown RBP8.65□□□□□ -1.03
ERCC8-202ENST00000381118 RPF1Q9H9Y2 349 aaKnown RBP8.65□□□□□ -1.03
ERCC8-202ENST00000381118 PIN4Q9Y237 131 aaKnown RBP8.65□□□□□ -1.03
ERCC8-202ENST00000381118 NOD1Q9Y239 953 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 HES2Q9Y543 173 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 ADGRG1Q9Y653 693 aa8.65□□□□□ -1.03
ERCC8-202ENST00000381118 F8VZ95 297 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 AKR1B10O60218 316 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 PHACTR2O75167 634 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 C4BPAP04003 597 aaKnown RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 HOXA11P31270 313 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 GTF2H1P32780 548 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 CYLC1P35663 651 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 USP8P40818 1118 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 KIF11P52732 1056 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 JAM2P57087 298 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 CLDN10P78369 228 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 NCBP1Q09161 790 aaKnown RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 KLHL30Q0D2K2 578 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 MTFR1Q15390 333 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 PTPN14Q15678 1187 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 ZACNQ401N2 412 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 HGSNATQ68CP4 663 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 SPOPLQ6IQ16 392 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 REXO1L1PQ8IX06 675 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 TATDN2Q93075 761 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 EIF2AQ9BY44 585 aaKnown RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 CELF4Q9BZC1 486 aaKnown RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 TRIM6Q9C030 488 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 GPR88Q9GZN0 384 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 UNC93B1Q9H1C4 597 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 HAUS4Q9H6D7 363 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 FBXL5Q9UKA1 691 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 CDY2AQ9Y6F7 541 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 A0A1W2PQ45 241 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 A0A1W2PQY0 241 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 CCP110O43303 1012 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 EVI5O60447 810 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 VNN1O95497 513 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 HLA-DRAP01903 254 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 SERPING1P05155 500 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 TMEM191BP0C7N4 346 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 MCF2P10911 925 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 TNNT1P13805 278 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 THPOP40225 353 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 CRYBB1P53674 252 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 MRPS6P82932 125 aaKnown RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 GFPT1Q06210 699 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 HSP90AA2PQ14568 343 aaPredicted RBP8.64□□□□□ -1.03
ERCC8-202ENST00000381118 NOTUMQ6P988 496 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 C15orf39Q6ZRI6 1047 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 RSPH3Q86UC2 560 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 SERINC5Q86VE9 423 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 WDR49Q8IV35 697 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 EFCAB13Q8IY85 973 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 NME8Q8N427 588 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 ZNF592Q92610 1267 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 NT5C1BQ96P26 610 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 STK33Q9BYT3 514 aa8.64□□□□□ -1.03
ERCC8-202ENST00000381118 STARD7Q9NQZ5 370 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms