RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 LAPTM4BQ86VI4 370 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 TMEM161BQ8NDZ6 487 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 PABPC5Q96DU9 382 aaKnown RBP10.13□□□□□ -0.79
HMGN1-202ENST00000380747 BICD1Q96G01 975 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 FBXL18Q96ME1 805 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 FAM193BQ96PV7 902 aaPredicted RBP10.13□□□□□ -0.79
HMGN1-202ENST00000380747 GAD1Q99259 594 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 NTPCRQ9BSD7 190 aaKnown RBP10.13□□□□□ -0.79
HMGN1-202ENST00000380747 TCHPQ9BT92 498 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 PLVAPQ9BX97 442 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 SCAND2PQ9GZW5 306 aaPredicted RBP10.13□□□□□ -0.79
HMGN1-202ENST00000380747 GDPD2Q9HCC8 539 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 TBC1D13Q9NVG8 400 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 TNFSF13BQ9Y275 285 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 DMDP11532 3685 aa10.13□□□□□ -0.79
HMGN1-202ENST00000380747 ARL5CA6NH57 179 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 NT5C1B-RDH14C9J2C7 533 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 ZC3H11AO75152 810 aaKnown RBP eCLIP10.12□□□□□ -0.79
HMGN1-202ENST00000380747 FGF18O76093 207 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 POMCP01189 267 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 ITGB1P05556 798 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 GAP43P17677 238 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 NMT1P30419 496 aaKnown RBP10.12□□□□□ -0.79
HMGN1-202ENST00000380747 MATR3P43243 847 aaKnown RBP eCLIP10.12□□□□□ -0.79
HMGN1-202ENST00000380747 SCNN1GP51170 649 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 AFF1P51825 1210 aaKnown RBP10.12□□□□□ -0.79
HMGN1-202ENST00000380747 ZNF131P52739 623 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 BCAR1P56945 870 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 DCAF4L1Q3SXM0 396 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 ZNF568Q3ZCX4 644 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 ADALQ6DHV7 355 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 SFR1Q86XK3 245 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 POF1BQ8WVV4 589 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 RSPH1Q8WYR4 309 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 P2RX5Q93086 422 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 SNX27Q96L92 541 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 RPS6KC1Q96S38 1066 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 ACO2Q99798 780 aaKnown RBP10.12□□□□□ -0.79
HMGN1-202ENST00000380747 LRRC27Q9C0I9 530 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 LMAN2LQ9H0V9 348 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 CDT1Q9H211 546 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 TNMDQ9H2S6 317 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 CUEDC2Q9H467 287 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 NRDE2Q9H7Z3 1164 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 SNTG2Q9NY99 539 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 TBC1D7Q9P0N9 293 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 KANSL3Q9P2N6 904 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 ANKFY1Q9P2R3 1169 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 LIMD1Q9UGP4 676 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 KCNH3Q9ULD8 1083 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 PLAGL2Q9UPG8 496 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 GDAQ9Y2T3 454 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 GIT1Q9Y2X7 761 aa10.12□□□□□ -0.79
HMGN1-202ENST00000380747 A0A1B0GVL5 298 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 NCK2O43639 380 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 DDHD2O94830 711 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 PFKFB1P16118 471 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 DNAJB1P25685 340 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 PPM1AP35813 382 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ALDH7A1P49419 539 aaKnown RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 LIG4P49917 911 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 OSTNP61366 133 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 AMPD3Q01432 767 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ZC2HC1CQ53FD0 456 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 HERC4Q5GLZ8 1057 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ADGRD1Q6QNK2 874 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 MPZL3Q6UWV2 235 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ZPBP2Q6X784 338 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ZNF280BQ86YH2 543 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ADHFE1Q8IWW8 467 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 CCDC65Q8IXS2 484 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 CEP57L1Q8IYX8 460 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 SPPL3Q8TCT6 385 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 MICAL1Q8TDZ2 1067 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 DNAJC19Q96DA6 116 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ZBTB45Q96K62 511 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ZFP42Q96MM3 310 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 PYM1Q9BRP8 204 aaKnown RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 CCDC94Q9BW85 323 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 MRPL44Q9H9J2 332 aaKnown RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 PTPRHQ9HD43 1115 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 PANK4Q9NVE7 773 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 KBTBD4Q9NVX7 518 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 MIOSQ9NXC5 875 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 SPG21Q9NZD8 308 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 DNAJB4Q9UDY4 337 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 SERTAD1Q9UHV2 236 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 PUF60Q9UHX1 559 aaKnown RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 TBX20Q9UMR3 447 aa10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ZFHX2Q9C0A1 2572 aaPredicted RBP10.11□□□□□ -0.79
HMGN1-202ENST00000380747 ZDBF2Q9HCK1 2354 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 B4GALT3O60512 393 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 TOM1L1O75674 476 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 RECQL4O94761 1208 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 ALDH2P05091 517 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 GALTP07902 379 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 MCF2P10911 925 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 SCP2P22307 547 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 CMA1P23946 247 aa10.1□□□□□ -0.79
HMGN1-202ENST00000380747 ABCD1P33897 745 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms