RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 PPP1R13BQ96KQ4 1090 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 C11orf70Q9BRQ4 267 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 NT5C1AQ9BXI3 368 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 SELENONQ9NZV5 590 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 CREB3O43889 395 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 RTN2O75298 545 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 RHOBTB3O94955 611 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 CYP2B6P20813 491 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 SYTL3Q4VX76 610 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 DAGLBQ8NCG7 672 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 CHCHD3Q9NX63 227 aaKnown RBP7.58□□□□□ -1.2
CCDC171-201ENST00000380701 ADAMTS1Q9UHI8 967 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 SLC30A1Q9Y6M5 507 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 ZC3H13Q5T200 1668 aaKnown RBP7.58□□□□□ -1.2
CCDC171-201ENST00000380701 SLC11A2P49281 568 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 ANXA11P50995 505 aaKnown RBP7.58□□□□□ -1.2
CCDC171-201ENST00000380701 CREMQ03060 361 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 PDK1Q15118 436 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 NFE2Q16621 373 aaPredicted RBP7.58□□□□□ -1.2
CCDC171-201ENST00000380701 TDRD10Q5VZ19 366 aaKnown RBP7.58□□□□□ -1.2
CCDC171-201ENST00000380701 CAPN12Q6ZSI9 719 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 MRPS31Q92665 395 aaKnown RBP7.58□□□□□ -1.2
CCDC171-201ENST00000380701 GPR101Q96P66 508 aaPredicted RBP7.58□□□□□ -1.2
CCDC171-201ENST00000380701 EGFL8Q99944 293 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 APOBEC2Q9Y235 224 aaKnown RBP7.58□□□□□ -1.2
CCDC171-201ENST00000380701 PTPRMP28827 1452 aa7.58□□□□□ -1.2
CCDC171-201ENST00000380701 MAPK13O15264 365 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 HNRNPRO43390 633 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 TGFB3P10600 412 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 MAP3K10Q02779 954 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 CCDC144BQ3MJ40 725 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 EPHA10Q5JZY3 1008 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 NAA35Q5VZE5 725 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 MFN1Q8IWA4 741 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 DNERQ8NFT8 737 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 PPWD1Q96BP3 646 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 CFAP36Q96G28 342 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 CCDC138Q96M89 665 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ZNF512Q96ME7 567 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 AGAP1Q9UPQ3 857 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 L3MBTL1Q9Y468 752 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 FBXO21O94952 628 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 VCLP18206 1134 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 EPHX2P34913 555 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ACTR2P61160 394 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 AARS2Q5JTZ9 985 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ATF7IP2Q5U623 682 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 PPP1R16BQ96T49 567 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 C7orf25Q9BPX7 421 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 GIMAP4Q9NUV9 329 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 NMRK1Q9NWW6 199 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 PSD3Q9NYI0 1048 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 FAM50BQ9Y247 325 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ATP8A1Q9Y2Q0 1164 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ZC3H11AO75152 810 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ADORA2BP29275 332 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 NBPF10Q6P3W6 841 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 PRUNE1Q86TP1 453 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 TTC30AQ86WT1 665 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 NBPF15Q8N660 670 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 SLC7A14Q8TBB6 771 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ZDHHC15Q96MV8 337 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 CPSF2Q9P2I0 782 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 KCNQ2O43526 872 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 EXTL3O43909 919 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 HNRNPCL1O60812 293 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ANP32DO95626 131 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 FGGP02679 453 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 URODP06132 367 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 PRR29P0C7W0 189 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 GTF2H1P32780 548 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 AP1B1Q10567 949 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 DRAP1Q14919 205 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 MORF4L2Q15014 288 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 RABGAP1LQ5R372 815 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 TBC1D1Q86TI0 1168 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ATPAF2Q8N5M1 289 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 RMDN1Q96DB5 314 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 STK33Q9BYT3 514 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 NEUROG2Q9H2A3 272 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 TMX2Q9Y320 296 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 PIK3R2O00459 728 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 NPTXRO95502 500 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 FKBP1BP68106 108 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 SNX1Q13596 522 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 MYBPC2Q14324 1141 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 TTLL9Q3SXZ7 439 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 TAF2Q6P1X5 1199 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ADAT2Q7Z6V5 191 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 STX19Q8N4C7 294 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 ALKBH8Q96BT7 664 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 GRAMD1AQ96CP6 724 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 SPDL1Q96EA4 605 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 NIF3L1Q9GZT8 377 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 MAF1Q9H063 256 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 TMEM60Q9H2L4 133 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 DHX35Q9H5Z1 703 aaKnown RBP7.57□□□□□ -1.2
CCDC171-201ENST00000380701 PRDM10Q9NQV6 1147 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms