RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 AIPL1Q9NZN9 384 aa18.91■□□□□ 0.62
UBL3-201ENST00000380680 RNF225M0QZC1 329 aaPredicted RBP18.9■□□□□ 0.62
UBL3-201ENST00000380680 EXTL3O43909 919 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 SGPL1O95470 568 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 CYP2C19P33261 490 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 ARMCX2Q7L311 632 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 C4orf19Q8IY42 314 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 C2orf69Q8N8R5 385 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 SLC5A5Q92911 643 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 CCDC97Q96F63 343 aaPredicted RBP18.9■□□□□ 0.62
UBL3-201ENST00000380680 ZIM3Q96PE6 472 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 CARD9Q9H257 536 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 SMARCAD1Q9H4L7 1026 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 C2CD6Q53TS8 623 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 TTC13Q8NBP0 860 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 GABPB2Q8TAK5 448 aaPredicted RBP18.9■□□□□ 0.62
UBL3-201ENST00000380680 KIF12Q96FN5 646 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 MAP3K20Q9NYL2 800 aaKnown RBP18.9■□□□□ 0.62
UBL3-201ENST00000380680 MAGED2Q9UNF1 606 aaPredicted RBP18.9■□□□□ 0.62
UBL3-201ENST00000380680 RASA4BC9J798 803 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 RASA4O43374 803 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 KRT7P08729 469 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 WEE2P0C1S8 567 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 WDR59Q6PJI9 974 aa18.9■□□□□ 0.62
UBL3-201ENST00000380680 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBL3-201ENST00000380680 FAM193BQ96PV7 902 aaPredicted RBP18.9■□□□□ 0.62
UBL3-201ENST00000380680 CIB2O75838 187 aa18.89■□□□□ 0.62
UBL3-201ENST00000380680 KRT3P12035 628 aa18.89■□□□□ 0.62
UBL3-201ENST00000380680 MIIPQ5JXC2 388 aa18.89■□□□□ 0.62
UBL3-201ENST00000380680 JAMLQ86YT9 394 aa18.89■□□□□ 0.62
UBL3-201ENST00000380680 TAS1R2Q8TE23 839 aa18.89■□□□□ 0.62
UBL3-201ENST00000380680 TBC1D31Q96DN5 1066 aa18.89■□□□□ 0.62
UBL3-201ENST00000380680 SPON1Q9HCB6 807 aa18.89■□□□□ 0.62
UBL3-201ENST00000380680 PPP2R5CQ13362 524 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 CCDC38Q502W7 563 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 DNAAF3Q8N9W5 541 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 RSRC1Q96IZ7 334 aaKnown RBP18.89■□□□□ 0.61
UBL3-201ENST00000380680 AGAP1Q9UPQ3 857 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 GTPBP10A4D1E9 387 aaKnown RBP18.89■□□□□ 0.61
UBL3-201ENST00000380680 LRRIQ3A6PVS8 624 aaPredicted RBP18.89■□□□□ 0.61
UBL3-201ENST00000380680 PPP1R11O60927 126 aaPredicted RBP18.89■□□□□ 0.61
UBL3-201ENST00000380680 MYL3P08590 195 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 SDC4P31431 198 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 TCF7P36402 384 aaPredicted RBP18.89■□□□□ 0.61
UBL3-201ENST00000380680 RFC5P40937 340 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 SLC1A1P43005 524 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 CAV1Q03135 178 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 PGM5Q15124 567 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 IZUMO3Q5VZ72 239 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 ATL2Q8NHH9 583 aa18.89■□□□□ 0.61
UBL3-201ENST00000380680 TACO1Q9BSH4 297 aaKnown RBP18.89■□□□□ 0.61
UBL3-201ENST00000380680 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.89■□□□□ 0.61
UBL3-201ENST00000380680 PHF2O75151 1096 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 SGSM1Q2NKQ1 1148 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 FAM133BQ5BKY9 247 aaKnown RBP18.88■□□□□ 0.61
UBL3-201ENST00000380680 C18orf8Q96DM3 657 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 FAM118BQ9BPY3 351 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.88■□□□□ 0.61
UBL3-201ENST00000380680 ARL4CP56559 192 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.88■□□□□ 0.61
UBL3-201ENST00000380680 GTF3C4Q9UKN8 822 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 GMNCA6NCL1 334 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 CYP3A4P08684 503 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 TGFB2P61812 414 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 MAP7D1Q3KQU3 841 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 BEST2Q8NFU1 509 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 FAF2Q96CS3 445 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 SNF8Q96H20 258 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 PIK3R2O00459 728 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 ITKQ08881 620 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 ECM1Q16610 540 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 DSTYKQ6XUX3 929 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 SDCCAG8Q86SQ7 713 aaPredicted RBP18.88■□□□□ 0.61
UBL3-201ENST00000380680 CCDC117Q8IWD4 279 aaPredicted RBP18.88■□□□□ 0.61
UBL3-201ENST00000380680 SLC20A1Q8WUM9 679 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 BTBD6Q96KE9 485 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 ERP44Q9BS26 406 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 TLR10Q9BXR5 811 aa18.88■□□□□ 0.61
UBL3-201ENST00000380680 KDM3BQ7LBC6 1761 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 ADAMTS3O15072 1205 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 SNHG28P0DPA3 235 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 FKBP1CQ5VVH2 108 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 SV2AQ7L0J3 742 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 AMIGO3Q86WK7 504 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 ISCUQ9H1K1 167 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 ABCC6O95255 1503 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 VWA5AO00534 786 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 HUS1O60921 280 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 BRAFP15056 766 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 MUM1L1Q5H9M0 696 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 IER5Q5VY09 327 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 THOC1Q96FV9 657 aaKnown RBP18.87■□□□□ 0.61
UBL3-201ENST00000380680 FZD1Q9UP38 647 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 ROBO3Q96MS0 1386 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 NAA25Q14CX7 972 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 FAM47EQ6ZV65 393 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 ARHGAP24Q8N264 748 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 CFAP36Q96G28 342 aa18.87■□□□□ 0.61
UBL3-201ENST00000380680 CYP3A7-CYP3A51PA0A087WV96 503 aa18.86■□□□□ 0.61
UBL3-201ENST00000380680 CYP3A7P24462 503 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms