RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 CPA5Q8WXQ8 436 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 C9orf72Q96LT7 481 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
PRPF40B-202ENST00000380281 ANKRD62A6NC57 917 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 ECEL1O95672 775 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 BCRP11274 1271 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 NOVP48745 357 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 LACTBP83111 547 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 CALCOCO2Q13137 446 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 CEP55Q53EZ4 464 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 FAM81AQ8TBF8 368 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 DCAF4Q8WV16 495 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 RBM41Q96IZ5 413 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 NAP1L4Q99733 375 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 UBE2OQ9C0C9 1292 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 RASAL2Q9UJF2 1139 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 O00370 1275 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 MXI1P50539 228 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 PRELPP51888 382 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 ITIH4Q14624 930 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 LRRC23Q53EV4 343 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 DUPD1Q68J44 220 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 PHC3Q8NDX5 983 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 PLEKHO2Q8TD55 490 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 ATXN2LQ8WWM7 1075 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 ACSF2Q96CM8 615 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 NYAP2Q9P242 653 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 MTRF1LQ9UGC7 380 aaKnown RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 TTC7AQ9ULT0 858 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 IGLV3-22A0A075B6J6 115 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 CYP3A7-CYP3A51PA0A087WV96 503 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 TCP11X1B4DZS4 312 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 ASAP2O43150 1006 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 ECE2O60344 883 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 FOSP01100 380 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 CYP3A7P24462 503 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 RAD23BP54727 409 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 PPATQ06203 517 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 CETN1Q12798 172 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 VPS72Q15906 364 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 ZDHHC24Q6UX98 284 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 SLFN11Q7Z7L1 901 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 ZNF564Q8TBZ8 553 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 OCEL1Q9H607 264 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 WDR35Q9P2L0 1181 aa13.3□□□□□ -0.28
PRPF40B-202ENST00000380281 MYH11P35749 1972 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 PSMC4P43686 418 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 GPC5P78333 572 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 CUL3Q13618 768 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 DAW1Q8N136 415 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 PPP1R12CQ9BZL4 782 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 CHST7Q9NS84 486 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 ANAPC7Q9UJX3 599 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 LAMB2P55268 1798 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 TESPA1A2RU30 521 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 PI4K2BG5E9Z4 385 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 NFIBO00712 420 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 TOM1O60784 492 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 FAM163BP0C2L3 166 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 VCAM1P19320 739 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 CHKAP35790 457 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 COPS2P61201 443 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 Q4G0T1 1027 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 SGO2Q562F6 1265 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 XKR9Q5GH70 373 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 SRRM1Q8IYB3 904 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 RASGEF1CQ8N431 466 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 SEMA4DQ92854 862 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 EPB41L4BQ9H329 900 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 CNOT10Q9H9A5 744 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 COL16A1Q07092 1604 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 RPTORQ8N122 1335 aa13.29□□□□□ -0.28
PRPF40B-202ENST00000380281 ZBTB48P10074 688 aaPredicted RBP13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 GAP43P17677 238 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 ALDH3A1P30838 453 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 ADCY8P40145 1251 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 POU5F1Q01860 360 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 LMNTD2Q8IXW0 634 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 ARHGEF2Q92974 986 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 BICD1Q96G01 975 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 GLT8D2Q9H1C3 349 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 CARD9Q9H257 536 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 ZDHHC18Q9NUE0 388 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 HSPBP1Q9NZL4 362 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 SPAG7O75391 227 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 PSMD10O75832 226 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 KRT17Q04695 432 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 SEZ6Q53EL9 994 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 SYCP2LQ5T4T6 812 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 RNF207Q6ZRF8 634 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 HAUS6Q7Z4H7 955 aa13.28□□□□□ -0.28
PRPF40B-202ENST00000380281 UCMAQ8WVF2 138 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms