RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 DBF4BQ8NFT6 615 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 POP1Q99575 1024 aaKnown RBP17.12■□□□□ 0.33
CCDC107-204ENST00000378409 FTHL17Q9BXU8 183 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 TOPORSQ9NS56 1045 aaPredicted RBP17.12■□□□□ 0.33
CCDC107-204ENST00000378409 PARP2Q9UGN5 583 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 PDE4DIPQ5VU43 2346 aa17.12■□□□□ 0.33
CCDC107-204ENST00000378409 STX10O60499 249 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 RECQL4O94761 1208 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 CXCL10P02778 98 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 TNNI1P19237 187 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 AKAP5P24588 427 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 ITGB8P26012 769 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 RFC2P35250 354 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 FMO5P49326 533 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 POU5F1Q01860 360 aaKnown RBP17.11■□□□□ 0.33
CCDC107-204ENST00000378409 ENPEPQ07075 957 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 PTPN21Q16825 1174 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 SLC10A6Q3KNW5 377 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 LMBRD2Q68DH5 695 aaPredicted RBP17.11■□□□□ 0.33
CCDC107-204ENST00000378409 HACE1Q8IYU2 909 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 C7orf61Q8IZ16 206 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 APBB2Q92870 758 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 MRFAP1L1Q96HT8 127 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 CGRRF1Q99675 332 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 TRAIPQ9BWF2 469 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 PRKAG2Q9UGJ0 569 aa17.11■□□□□ 0.33
CCDC107-204ENST00000378409 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 MEFVO15553 781 aaPredicted RBP17.1■□□□□ 0.33
CCDC107-204ENST00000378409 ITGA4P13612 1032 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 GCLMP48507 274 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 MCCD1P59942 119 aaPredicted RBP17.1■□□□□ 0.33
CCDC107-204ENST00000378409 MYL7Q01449 175 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 PPP3CAQ08209 521 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 LINC01599Q8WXQ3 324 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 FAM84AQ96KN4 292 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 HTATIP2Q9BUP3 242 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 TSPYL2Q9H2G4 693 aaPredicted RBP17.1■□□□□ 0.33
CCDC107-204ENST00000378409 RGS18Q9NS28 235 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 PTPRJQ12913 1337 aa17.1■□□□□ 0.33
CCDC107-204ENST00000378409 TNRC18O15417 2968 aaPredicted RBP17.1■□□□□ 0.33
CCDC107-204ENST00000378409 TTC3P53804 2025 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 TTC26A0AVF1 554 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 N4BP1O75113 896 aaKnown RBP17.09■□□□□ 0.33
CCDC107-204ENST00000378409 SKIP12755 728 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 MXI1P50539 228 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 CLDN10P78369 228 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 TCTN1Q2MV58 587 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 CBWD3Q5JTY5 395 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 CBWD5Q5RIA9 395 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 MFSD5Q6N075 450 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 RTN4RL1Q86UN2 441 aaPredicted RBP17.09■□□□□ 0.33
CCDC107-204ENST00000378409 WDR49Q8IV35 697 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 DRC7Q8IY82 874 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 TMEM199Q8N511 208 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 LPPQ93052 612 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 SNX27Q96L92 541 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 C1orf112Q9NSG2 853 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 KLK14Q9P0G3 267 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
CCDC107-204ENST00000378409 MEIS3P2A8K0S8 358 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 ZNF623O75123 536 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 NFICP08651 508 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 CSF2RAP15509 400 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 CDC25BP30305 580 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 GTF2H1P32780 548 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 TFAMQ00059 246 aaKnown RBP17.08■□□□□ 0.32
CCDC107-204ENST00000378409 SYCP1Q15431 976 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 JADE1Q6IE81 842 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 CNKSR3Q6P9H4 555 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 FAM43BQ6ZT52 329 aaPredicted RBP17.08■□□□□ 0.32
CCDC107-204ENST00000378409 MRPL10Q7Z7H8 261 aaKnown RBP17.08■□□□□ 0.32
CCDC107-204ENST00000378409 ECHDC2Q86YB7 292 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 CD302Q8IX05 232 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 EFCAB13Q8IY85 973 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 OR5B17Q8NGF7 314 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 ZNF516Q92618 1163 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 PGBD4Q96DM1 585 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.32
CCDC107-204ENST00000378409 CRACR2AQ9BSW2 395 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 TMEM117Q9H0C3 514 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 ASB7Q9H672 318 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 PLEKHA5Q9HAU0 1116 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.32
CCDC107-204ENST00000378409 C9IYK1 514 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 ENPP3O14638 875 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 EVI5O60447 810 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 TNNC2P02585 160 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 TMEM191BP0C7N4 346 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 ATF7P17544 494 aaPredicted RBP17.07■□□□□ 0.32
CCDC107-204ENST00000378409 PBX1P40424 430 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 BIRC3Q13489 604 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 TMEM132DQ14C87 1099 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 KRT39Q6A163 491 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 GBP6Q6ZN66 633 aa17.07■□□□□ 0.32
CCDC107-204ENST00000378409 TMC6Q7Z403 805 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms