RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ATP6V1G3Q96LB4 118 aa14.02□□□□□ -0.17
NPHP4-203ENST00000378169 GCOM2Q9BZD3 368 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-203ENST00000378169 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 RARBP10826 455 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 BRAFP15056 766 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 HIBCHQ6NVY1 386 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-203ENST00000378169 EFCAB12Q6NXP0 572 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 ZBED8Q8IZ13 594 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 ARHGAP24Q8N264 748 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 TAS1R2Q8TE23 839 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 SYN2Q92777 582 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-203ENST00000378169 GPRASP2Q96D09 838 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 ACAP3Q96P50 834 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 DHX35Q9H5Z1 703 aaKnown RBP14.01□□□□□ -0.17
NPHP4-203ENST00000378169 UVRAGQ9P2Y5 699 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 PIN4Q9Y237 131 aaKnown RBP14.01□□□□□ -0.17
NPHP4-203ENST00000378169 CREB3O43889 395 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 CSDE1O75534 798 aaKnown RBP14.01□□□□□ -0.17
NPHP4-203ENST00000378169 RARRES1P49788 294 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 ARL4CP56559 192 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 FAM83AQ86UY5 434 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 MCUQ8NE86 351 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 MCEEQ96PE7 176 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 OATP04181 439 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 KRT7P08729 469 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 ARSEP51690 589 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 CASP5P51878 434 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 BEND6Q5SZJ8 279 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-203ENST00000378169 SCN4BQ8IWT1 228 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 TPCN2Q8NHX9 752 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 VGLL3A8MV65 326 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 SGPL1O95470 568 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 PDIA2Q13087 525 aaKnown RBP14.01□□□□□ -0.17
NPHP4-203ENST00000378169 E2F5Q15329 346 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 C1orf228Q6PIY5 440 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 ANKRD13AQ8IZ07 590 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 OR6J1Q8NGC5 347 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 TTC17Q96AE7 1141 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 AFG3L2Q9Y4W6 797 aa14.01□□□□□ -0.17
NPHP4-203ENST00000378169 PPP2R2AP63151 447 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 DHX34Q14147 1143 aaKnown RBP14□□□□□ -0.17
NPHP4-203ENST00000378169 KIAA1841Q6NSI8 718 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 ZNF449Q6P9G9 518 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 RNF139Q8WU17 664 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 SCFD2Q8WU76 684 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 FMN2Q9NZ56 1722 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 SLIT3O75094 1523 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 MYO1CO00159 1063 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 MEIS2O14770 477 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 PDGFRBP09619 1106 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 ANXA13P27216 316 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 CLCN3P51790 818 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 CRY2Q49AN0 593 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 KCNV1Q6PIU1 500 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 TTC13Q8NBP0 860 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 CHST13Q8NET6 341 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
NPHP4-203ENST00000378169 FAM49BQ9NUQ9 324 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 AKAP12Q02952 1782 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 LRRC10BA6NIK2 292 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 TISP43B9A030 160 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 PLSCR1O15162 318 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 KLRC4O43908 158 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 DDNO94850 711 aaPredicted RBP14□□□□□ -0.17
NPHP4-203ENST00000378169 CTSHP09668 335 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 MYBL1P10243 752 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 CYP2B6P20813 491 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 GTF2H1P32780 548 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 SMTNL2Q2TAL5 461 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 TMEM119Q4V9L6 283 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 ATF7IP2Q5U623 682 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 C4orf50Q6ZRC1 276 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 C15orf52Q6ZUT6 534 aaKnown RBP14□□□□□ -0.17
NPHP4-203ENST00000378169 KCTD17Q8N5Z5 321 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 CFAP61Q8NHU2 1237 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 PITPNM3Q9BZ71 974 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 HPCAL4Q9UM19 191 aa14□□□□□ -0.17
NPHP4-203ENST00000378169 DISP2A7MBM2 1401 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 IQCA1LA6NCM1 817 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 TOM1L1O75674 476 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 CALRP27797 417 aaKnown RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 NME3Q13232 169 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 JAMLQ86YT9 394 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 PPM1NQ8N819 430 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 MORC4Q8TE76 937 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 ZNF384Q8TF68 577 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 SLC20A1Q8WUM9 679 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 ACSF2Q96CM8 615 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 FUT8Q9BYC5 575 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 KLC2Q9H0B6 622 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 PXMP2Q9NR77 195 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 OLFML3Q9NRN5 406 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 A0A087WUV0 522 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 H2AFXP16104 143 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 PDGFRAP16234 1089 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 ORC1Q13415 861 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 SGSM1Q2NKQ1 1148 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 XRRA1Q6P2D8 792 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 SLC35C1Q96A29 364 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms