RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 METTL14Q9HCE5 456 aaKnown RBP16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 ETNK2Q9NVF9 386 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 WHRNQ9P202 907 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 DNAJC12Q9UKB3 198 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 BLOC1S6Q9UL45 172 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 POTEFA5A3E0 1075 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 POTEJP0CG39 1038 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 MUTP22033 750 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 ITGA8P53708 1063 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 MESDQ14696 234 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 KNOP1Q1ED39 458 aaKnown RBP16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 POTEEQ6S8J3 1075 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 OTOAQ7RTW8 1153 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 BTBD6Q96KE9 485 aa16.7■□□□□ 0.26
CSNK1A1-202ENST00000377843 MIF4GDA9UHW6 222 aaKnown RBP16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 CDH16O75309 829 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 KLRK1P26718 216 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 PRDX5P30044 214 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 RFC4P35249 363 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 LIN52Q52LA3 116 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 SEL1L2Q5TEA6 688 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 C11orf63Q6NUN7 778 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 RNF207Q6ZRF8 634 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 RFX8Q6ZV50 586 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 CD101Q93033 1021 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 C9orf72Q96LT7 481 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 STX18Q9P2W9 335 aaKnown RBP16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 ASIC3Q9UHC3 531 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 PCDHB13Q9Y5F0 798 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 ASTN1O14525 1302 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 ATMINO43313 823 aaPredicted RBP16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 TSPY3P0CV98 308 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 TSPY8P0CW00 308 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 GCAP28676 217 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 ERFP50548 548 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 BPIFB4P59827 614 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 TMEM62Q0P6H9 643 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 SLC1A5Q15758 541 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 C12orf60Q5U649 245 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 LCA5Q86VQ0 697 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 ATG4AQ8WYN0 398 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 PTCD3Q96EY7 689 aaKnown RBP16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 RBM17Q96I25 401 aaKnown RBP16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 NPHS2Q9NP85 383 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 DDX43Q9NXZ2 648 aaKnown RBP16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 HSFX1Q9UBD0 423 aa16.69■□□□□ 0.26
CSNK1A1-202ENST00000377843 MAP3K7O43318 606 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 TNFAIP3P21580 790 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 AMPD1P23109 780 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 SLC45A4Q5BKX6 768 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 RINLQ6ZS11 566 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 HS2ST1Q7LGA3 356 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 SFR1Q86XK3 245 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 KIAA0825Q8IV33 1275 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 BTBD10Q9BSF8 475 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 STK33Q9BYT3 514 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 ASCC2Q9H1I8 757 aaPredicted RBP16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 VCX3BQ9H321 246 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 VCX3AQ9NNX9 186 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 STK32BQ9NY57 414 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 ACTL7BQ9Y614 415 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 SLC4A7Q9Y6M7 1214 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 LAMB1P07942 1786 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 A6NJR5 290 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 CLDN3O15551 220 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 GGPS1O95749 300 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 NR3C1P04150 777 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 RPA3P35244 121 aaPredicted RBP16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 TNNI2P48788 182 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 VPS41P49754 854 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 PPP2R5CQ13362 524 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 PDK4Q16654 411 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 UBE2SQ16763 222 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 HYIQ5T013 277 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 RGS9BPQ6ZS82 235 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 RFWD2Q8NHY2 731 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 ADAM33Q9BZ11 813 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 CHST7Q9NS84 486 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 TMCO1Q9UM00 188 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 JAG2Q9Y219 1238 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 TBC1D30Q9Y2I9 924 aa16.68■□□□□ 0.26
CSNK1A1-202ENST00000377843 KRT18P05783 430 aaKnown RBP16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 MAGEA10P43363 369 aaPredicted RBP16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 SLC12A3P55017 1021 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 TRABD2AQ86V40 505 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 C4orf33Q8N1A6 199 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 ANKRD35Q8N283 1001 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 C12orf50Q8NA57 414 aaPredicted RBP16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 LINC00116Q8NCU8 138 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 CFAP61Q8NHU2 1237 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 DYDC2Q96IM9 177 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 LRRC19Q9H756 370 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 SYNCQ9H7C4 482 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 MKNK2Q9HBH9 465 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 SAR1AQ9NR31 198 aa16.67■□□□□ 0.26
CSNK1A1-202ENST00000377843 DCTN4Q9UJW0 460 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms