RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 EPCAMP16422 314 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 OSTNP61366 133 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 CREMQ03060 361 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 CBX2Q14781 532 aaPredicted RBP18.42■□□□□ 0.54
HMGN4-201ENST00000377575 USP41Q3LFD5 358 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 RRAGBQ5VZM2 374 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 ELMSAN1Q6PJG2 1045 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 CCDC73Q6ZRK6 1079 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 USP49Q70CQ1 688 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 HAUS6Q7Z4H7 955 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 GPR65Q8IYL9 337 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 CEP120Q8N960 986 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 UROC1Q96N76 676 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 ACAP3Q96P50 834 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 APOL5Q9BWW9 433 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 PHF7Q9BWX1 381 aaPredicted RBP18.42■□□□□ 0.54
HMGN4-201ENST00000377575 ZHX3Q9H4I2 956 aa18.42■□□□□ 0.54
HMGN4-201ENST00000377575 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.42■□□□□ 0.54
HMGN4-201ENST00000377575 MTCL1Q9Y4B5 1905 aaKnown RBP18.42■□□□□ 0.54
HMGN4-201ENST00000377575 ABLIM1O14639 778 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 TRAK2O60296 914 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 KIF4AO95239 1232 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 MATR3P43243 847 aaKnown RBP eCLIP18.41■□□□□ 0.54
HMGN4-201ENST00000377575 CLCN4P51793 760 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 ELAVL2Q12926 359 aaKnown RBP18.41■□□□□ 0.54
HMGN4-201ENST00000377575 NAB2Q15742 525 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 GLRA4Q5JXX5 417 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 KIAA0319Q5VV43 1072 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 TAS1R1Q7RTX1 841 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 SLC22A17Q8WUG5 538 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 RABGGTAQ92696 567 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 SNX27Q96L92 541 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 NECTIN4Q96NY8 510 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 PPP1R10Q96QC0 940 aaKnown RBP18.41■□□□□ 0.54
HMGN4-201ENST00000377575 PAAF1Q9BRP4 392 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 GPR62Q9BZJ7 368 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 ADAM7Q9H2U9 754 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 SFXN1Q9H9B4 322 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 CHST7Q9NS84 486 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 SLC38A7Q9NVC3 462 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 CACNG4Q9UBN1 327 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 DENND4AQ7Z401 1863 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 VWA8A3KMH1 1905 aa18.41■□□□□ 0.54
HMGN4-201ENST00000377575 HNRNPDLO14979 420 aaKnown RBP18.4■□□□□ 0.54
HMGN4-201ENST00000377575 SPTLC2O15270 562 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 CLDN3O15551 220 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 YEATS4O95619 227 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 ZSCAN22P10073 491 aaPredicted RBP18.4■□□□□ 0.54
HMGN4-201ENST00000377575 ALADP13716 330 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 STAT6P42226 847 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 LIG4P49917 911 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 MCL1Q07820 350 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 SV2BQ7L1I2 683 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 LINC00301Q8NCQ3 95 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 HASPINQ8TF76 798 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 FBXL18Q96ME1 805 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 RIPOR3Q96MK2 946 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 CXCL16Q9H2A7 254 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 RXFP1Q9HBX9 757 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 DPP7Q9UHL4 492 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 TBX20Q9UMR3 447 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 C2orf16Q68DN1 1984 aa18.4■□□□□ 0.54
HMGN4-201ENST00000377575 SMIM28A0A1B0GU29 152 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 PI4K2BG5E9Z4 385 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 TMEM189-UBE2V1I3L0A0 370 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 TEX28O15482 410 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 PPP6R2O75170 966 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 GLUD1P00367 558 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 F13A1P00488 732 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 MTHFRP42898 656 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 XKR4Q5GH76 650 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 RARS2Q5T160 578 aaKnown RBP18.39■□□□□ 0.53
HMGN4-201ENST00000377575 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.53
HMGN4-201ENST00000377575 ALKAL1Q6UXT8 129 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.53
HMGN4-201ENST00000377575 RIN2Q8WYP3 895 aaPredicted RBP18.39■□□□□ 0.53
HMGN4-201ENST00000377575 KHSRPQ92945 711 aaKnown RBP eCLIP18.39■□□□□ 0.533e-6■■■□□ 15.8
HMGN4-201ENST00000377575 ZBTB45Q96K62 511 aaPredicted RBP18.39■□□□□ 0.53
HMGN4-201ENST00000377575 EPHX3Q9H6B9 360 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 CNTN3Q9P232 1028 aa18.39■□□□□ 0.53
HMGN4-201ENST00000377575 LOC730098B7Z3J9 87 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 DCXO43602 365 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 PIGRP01833 764 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 KCNE1P15382 129 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 KYAT1Q16773 422 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 PDXDC1Q6P996 788 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 DDX12PQ92771 950 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 RPGRIP1Q96KN7 1286 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 B3GALT6Q96L58 329 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 TTPALQ9BTX7 342 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 MAN1C1Q9NR34 630 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 FNIP2Q9P278 1114 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 SEL1LQ9UBV2 794 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 NR2E1Q9Y466 385 aa18.38■□□□□ 0.53
HMGN4-201ENST00000377575 B3GAT3O94766 335 aa18.37■□□□□ 0.53
HMGN4-201ENST00000377575 C1RP00736 705 aa18.37■□□□□ 0.53
HMGN4-201ENST00000377575 CLCNKBP51801 687 aa18.37■□□□□ 0.53
HMGN4-201ENST00000377575 GTF2BQ00403 316 aa18.37■□□□□ 0.53
HMGN4-201ENST00000377575 UPP1Q16831 310 aa18.37■□□□□ 0.53
HMGN4-201ENST00000377575 FAM171A1Q5VUB5 890 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms