RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 RPF1Q9H9Y2 349 aaKnown RBP29.6■■■□□ 2.33
COMMD3-201ENST00000376836 PLEKHA5Q9HAU0 1116 aa29.6■■■□□ 2.33
COMMD3-201ENST00000376836 EXOC1Q9NV70 894 aa29.6■■■□□ 2.33
COMMD3-201ENST00000376836 COG5Q9UP83 839 aa29.6■■■□□ 2.33
COMMD3-201ENST00000376836 CUL9Q8IWT3 2517 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 SMIM28A0A1B0GU29 152 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 EIF3DO15371 548 aaKnown RBP eCLIP29.59■■■□□ 2.33
COMMD3-201ENST00000376836 PRPF6O94906 941 aaKnown RBP29.59■■■□□ 2.33
COMMD3-201ENST00000376836 SMC1AQ14683 1233 aaKnown RBP29.59■■■□□ 2.33
COMMD3-201ENST00000376836 GLRA4Q5JXX5 417 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 PLPP4Q5VZY2 271 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 SLC39A4Q6P5W5 647 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 ALKAL1Q6UXT8 129 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 TMEM173Q86WV6 379 aaPredicted RBP29.59■■■□□ 2.33
COMMD3-201ENST00000376836 HPS3Q969F9 1004 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 UROC1Q96N76 676 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 AGO2Q9UKV8 859 aaKnown RBP29.59■■■□□ 2.33
COMMD3-201ENST00000376836 STYXL1Q9Y6J8 313 aa29.59■■■□□ 2.33
COMMD3-201ENST00000376836 CASTOR2A6NHX0 329 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 TADA2AO75478 443 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 PPP2R3AQ06190 1150 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 KCNA1Q09470 495 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 HSP90AA2PQ14568 343 aaPredicted RBP29.58■■■□□ 2.33
COMMD3-201ENST00000376836 XKR4Q5GH76 650 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 HLA-CQ95604 372 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 PPP1R10Q96QC0 940 aaKnown RBP29.58■■■□□ 2.33
COMMD3-201ENST00000376836 TLE6Q9H808 572 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 CNTN3Q9P232 1028 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 THEGQ9P2T0 379 aa29.58■■■□□ 2.33
COMMD3-201ENST00000376836 FSD2A1L4K1 749 aa29.57■■■□□ 2.32
COMMD3-201ENST00000376836 FSCN2O14926 492 aa29.57■■■□□ 2.32
COMMD3-201ENST00000376836 KCNE1P15382 129 aa29.57■■■□□ 2.32
COMMD3-201ENST00000376836 PSMD2Q13200 908 aa29.57■■■□□ 2.32
COMMD3-201ENST00000376836 SLC10A6Q3KNW5 377 aa29.57■■■□□ 2.32
COMMD3-201ENST00000376836 BCL7CQ8WUZ0 217 aaPredicted RBP29.57■■■□□ 2.32
COMMD3-201ENST00000376836 FGFBP2Q9BYJ0 223 aa29.57■■■□□ 2.32
COMMD3-201ENST00000376836 IGFLR1Q9H665 355 aa29.57■■■□□ 2.32
COMMD3-201ENST00000376836 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.57■■■□□ 2.32
COMMD3-201ENST00000376836 PRRC2BQ5JSZ5 2229 aaKnown RBP29.57■■■□□ 2.32
COMMD3-201ENST00000376836 CXCL14O95715 111 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 CXCL8P10145 99 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 FAM160A1Q05DH4 1040 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 EP400NLQ6ZTU2 488 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 CD302Q8IX05 232 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 ZNF507Q8TCN5 953 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 CXCL16Q9H2A7 254 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 HOOK1Q9UJC3 728 aaKnown RBP29.56■■■□□ 2.32
COMMD3-201ENST00000376836 PLXNA4Q9HCM2 1894 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 UBE4BO95155 1302 aa29.56■■■□□ 2.32
COMMD3-201ENST00000376836 UNC80Q8N2C7 3258 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 TDRD15B5MCY1 1934 aaKnown RBP29.55■■■□□ 2.32
COMMD3-201ENST00000376836 TISP43B9A030 160 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 LDHAP00338 332 aaKnown RBP29.55■■■□□ 2.32
COMMD3-201ENST00000376836 GARTP22102 1010 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 TNFSF9P41273 254 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 RBM23Q86U06 439 aaKnown RBP29.55■■■□□ 2.32
COMMD3-201ENST00000376836 FMR1NBQ8N0W7 255 aaPredicted RBP29.55■■■□□ 2.32
COMMD3-201ENST00000376836 FAM212AQ96EL1 285 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 DDX27Q96GQ7 796 aaKnown RBP29.55■■■□□ 2.32
COMMD3-201ENST00000376836 TSPAN18Q96SJ8 248 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 CDCA3Q99618 268 aaPredicted RBP29.55■■■□□ 2.32
COMMD3-201ENST00000376836 SLC39A2Q9NP94 309 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 MARCH5Q9NX47 278 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 ADAM28Q9UKQ2 775 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 SSX2IPQ9Y2D8 614 aa29.55■■■□□ 2.32
COMMD3-201ENST00000376836 XPOTO43592 962 aaKnown RBP29.54■■■□□ 2.32
COMMD3-201ENST00000376836 RPN1P04843 607 aaKnown RBP29.54■■■□□ 2.32
COMMD3-201ENST00000376836 CTSAP10619 480 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 NRIP1P48552 1158 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 EHHADHQ08426 723 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 HYAL1Q12794 435 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 NAB2Q15742 525 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 AAK1Q2M2I8 961 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 KMT5BQ4FZB7 885 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.54■■■□□ 2.32
COMMD3-201ENST00000376836 MRPL43Q8N983 215 aaKnown RBP29.54■■■□□ 2.32
COMMD3-201ENST00000376836 RABGGTAQ92696 567 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 IPO9Q96P70 1041 aaKnown RBP29.54■■■□□ 2.32
COMMD3-201ENST00000376836 ZBP1Q9H171 429 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 CPSF3Q9UKF6 684 aaKnown RBP29.54■■■□□ 2.32
COMMD3-201ENST00000376836 PCDHGC5Q9Y5F6 944 aa29.54■■■□□ 2.32
COMMD3-201ENST00000376836 SOD2P04179 222 aa29.53■■■□□ 2.32
COMMD3-201ENST00000376836 ACOT2P49753 483 aa29.53■■■□□ 2.32
COMMD3-201ENST00000376836 POU5F1Q01860 360 aaKnown RBP29.53■■■□□ 2.32
COMMD3-201ENST00000376836 ENOX2Q16206 610 aaKnown RBP29.53■■■□□ 2.32
COMMD3-201ENST00000376836 KIAA1841Q6NSI8 718 aa29.53■■■□□ 2.32
COMMD3-201ENST00000376836 ARMCX5Q6P1M9 558 aa29.53■■■□□ 2.32
COMMD3-201ENST00000376836 DCLRE1AQ6PJP8 1040 aa29.53■■■□□ 2.32
COMMD3-201ENST00000376836 EPM2AIP1Q7L775 607 aaPredicted RBP29.53■■■□□ 2.32
COMMD3-201ENST00000376836 GLIS3Q8NEA6 775 aa29.53■■■□□ 2.32
COMMD3-201ENST00000376836 PABPC5Q96DU9 382 aaKnown RBP29.53■■■□□ 2.32
COMMD3-201ENST00000376836 IKZF4Q9H2S9 585 aa29.53■■■□□ 2.32
COMMD3-201ENST00000376836 PRDM6Q9NQX0 595 aa29.53■■■□□ 2.32
COMMD3-201ENST00000376836 MRPL17Q9NRX2 175 aaKnown RBP29.53■■■□□ 2.32
COMMD3-201ENST00000376836 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.52■■■□□ 2.32
COMMD3-201ENST00000376836 TTC26A0AVF1 554 aa29.52■■■□□ 2.32
COMMD3-201ENST00000376836 KIAA0391O15091 583 aaKnown RBP29.52■■■□□ 2.32
COMMD3-201ENST00000376836 KLRC4O43908 158 aa29.52■■■□□ 2.32
COMMD3-201ENST00000376836 FAM189A1O60320 539 aa29.52■■■□□ 2.32
COMMD3-201ENST00000376836 URODP06132 367 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms