RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 CGRRF1Q99675 332 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 AGPAT1Q99943 283 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 TUBB2BQ9BVA1 445 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 GNEQ9Y223 722 aaKnown RBP13.94□□□□□ -0.18
TRIM40-206ENST00000376724 JRKLQ9Y4A0 524 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 ZNF236Q9UL36 1845 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 COL1A2P08123 1366 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
TRIM40-206ENST00000376724 EFCAB8A8MWE9 144 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 OGTO15294 1046 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 PHACTR2O75167 634 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 H2AFZP0C0S5 128 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 ZSCAN20P17040 1043 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-206ENST00000376724 CTGFP29279 349 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 NOP2P46087 812 aaKnown RBP13.93□□□□□ -0.18
TRIM40-206ENST00000376724 MCL1Q07820 350 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 MARCH8Q5T0T0 291 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 TAF3Q5VWG9 929 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 PAPD7Q5XG87 772 aaKnown RBP13.93□□□□□ -0.18
TRIM40-206ENST00000376724 EEF1DP3Q658K8 133 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 SPOPLQ6IQ16 392 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 MPZL3Q6UWV2 235 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 TSHZ1Q6ZSZ6 1077 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 H2AFVQ71UI9 128 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 CEP112Q8N8E3 955 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 OLIG1Q8TAK6 271 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 ANKRD7Q92527 254 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 C1orf112Q9NSG2 853 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 GJD2Q9UKL4 321 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 ANO9A1A5B4 782 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 A6NJR5 290 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 ABLIM1O14639 778 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 NCK2O43639 380 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 FAM189A1O60320 539 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 PALMO75781 387 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 VNN1O95497 513 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 HOXD8P13378 290 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-206ENST00000376724 KRT5P13647 590 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 CYP4F22Q6NT55 531 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 SRGAP1Q7Z6B7 1085 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 SLC47A2Q86VL8 602 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 PALB2Q86YC2 1186 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 BRSK2Q8IWQ3 736 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 FAM71AQ8IYT1 594 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 RPUSD2Q8IZ73 545 aaKnown RBP13.93□□□□□ -0.18
TRIM40-206ENST00000376724 LINC01465Q8N7H1 131 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 CEP120Q8N960 986 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 PSMB7Q99436 277 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 APBA2Q99767 749 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 ARID3AQ99856 593 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 SYT11Q9BT88 431 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 PRDM10Q9NQV6 1147 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 TAS2R14Q9NYV8 317 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 NENFQ9UMX5 172 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 GINS2Q9Y248 185 aa13.93□□□□□ -0.18
TRIM40-206ENST00000376724 ZNF185O15231 689 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 ABCB4P21439 1286 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 GALCP54803 685 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 BEX3Q00994 111 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 TMEM62Q0P6H9 643 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 WHAMMP3Q1A5X7 153 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 SCARA3Q6AZY7 606 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 SOCS4Q8WXH5 440 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 SHC3Q92529 594 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 CPB2Q96IY4 423 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-206ENST00000376724 EPC1Q9H2F5 836 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 PTPRHQ9HD43 1115 aa13.92□□□□□ -0.18
TRIM40-206ENST00000376724 PRMT7Q9NVM4 692 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-206ENST00000376724 TMEM88BA6NKF7 163 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 FTCDO95954 541 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 MYL3P08590 195 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 PROZP22891 400 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 DNA2P51530 1060 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 NFRKBQ6P4R8 1299 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 NOP9Q86U38 636 aaKnown RBP13.91□□□□□ -0.18
TRIM40-206ENST00000376724 LMBR1Q8WVP7 490 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 GOLGA1Q92805 767 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 NFKBIZQ9BYH8 718 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 ARHGAP39Q9C0H5 1083 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 CPSF3Q9UKF6 684 aaKnown RBP13.91□□□□□ -0.18
TRIM40-206ENST00000376724 MYH10P35580 1976 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 CA12O43570 354 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 ZEB2O60315 1214 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM40-206ENST00000376724 TBC1D8O95759 1140 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 CALCAP01258 141 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 SMIM10L2AP0DMW4 78 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 SMIM10L2BP0DMW5 78 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 CXCR5P32302 372 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 TM4SF4P48230 202 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 TMEM192Q8IY95 271 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 KIAA0319LQ8IZA0 1049 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 SMC1BQ8NDV3 1235 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 EPS8L1Q8TE68 723 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 KAT2BQ92831 832 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 AP5M1Q9H0R1 490 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms