RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 DMP1Q13316 513 aaPredicted RBP23.13■■□□□ 1.29
VSX1-201ENST00000376707 IL17AQ16552 155 aa23.13■■□□□ 1.29
VSX1-201ENST00000376707 RILPL1Q5EBL4 403 aa23.13■■□□□ 1.29
VSX1-201ENST00000376707 PIK3R5Q8WYR1 880 aa23.13■■□□□ 1.29
VSX1-201ENST00000376707 DRC1Q96MC2 740 aa23.13■■□□□ 1.29
VSX1-201ENST00000376707 IGSF9Q9P2J2 1179 aa23.13■■□□□ 1.29
VSX1-201ENST00000376707 TNFSF13BQ9Y275 285 aa23.13■■□□□ 1.29
VSX1-201ENST00000376707 N4BP1O75113 896 aaKnown RBP23.12■■□□□ 1.29
VSX1-201ENST00000376707 NUBP1P53384 320 aa23.12■■□□□ 1.29
VSX1-201ENST00000376707 ZRSR1Q15695 479 aaKnown RBP23.12■■□□□ 1.29
VSX1-201ENST00000376707 PSMD5Q16401 504 aa23.12■■□□□ 1.29
VSX1-201ENST00000376707 GLRA4Q5JXX5 417 aa23.12■■□□□ 1.29
VSX1-201ENST00000376707 RUSC1Q9BVN2 902 aa23.12■■□□□ 1.29
VSX1-201ENST00000376707 PRKD2Q9BZL6 878 aa23.12■■□□□ 1.29
VSX1-201ENST00000376707 IRF2BPLQ9H1B7 796 aa23.12■■□□□ 1.29
VSX1-201ENST00000376707 KMT5AQ9NQR1 393 aa23.12■■□□□ 1.29
VSX1-201ENST00000376707 C2orf16Q68DN1 1984 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 H3BQV1 296 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 ZMYND10O75800 440 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 PAPLNO95428 1278 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 GJB2P29033 226 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 YARSP54577 528 aaKnown RBP23.11■■□□□ 1.29
VSX1-201ENST00000376707 ZNF568Q3ZCX4 644 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 RINT1Q6NUQ1 792 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 PDXDC1Q6P996 788 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 DAW1Q8N136 415 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 LNX1Q8TBB1 728 aaPredicted RBP23.11■■□□□ 1.29
VSX1-201ENST00000376707 PHOX2BQ99453 314 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 CLSTN3Q9BQT9 956 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 MMTAG2Q9BU76 263 aaKnown RBP23.11■■□□□ 1.29
VSX1-201ENST00000376707 CCDC94Q9BW85 323 aaPredicted RBP23.11■■□□□ 1.29
VSX1-201ENST00000376707 MRPL4Q9BYD3 311 aaKnown RBP23.11■■□□□ 1.29
VSX1-201ENST00000376707 TMEM134Q9H6X4 195 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 DUSP12Q9UNI6 340 aa23.11■■□□□ 1.29
VSX1-201ENST00000376707 RBM19Q9Y4C8 960 aaKnown RBP23.11■■□□□ 1.29
VSX1-201ENST00000376707 B3GAT3O94766 335 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 ATP2C1P98194 919 aaPredicted RBP23.1■■□□□ 1.29
VSX1-201ENST00000376707 LIN9Q5TKA1 542 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.1■■□□□ 1.29
VSX1-201ENST00000376707 C1orf186Q6ZWK4 172 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 KCNK18Q7Z418 384 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 UROC1Q96N76 676 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 PPP1R10Q96QC0 940 aaKnown RBP23.1■■□□□ 1.29
VSX1-201ENST00000376707 ACO2Q99798 780 aaKnown RBP23.1■■□□□ 1.29
VSX1-201ENST00000376707 CDT1Q9H211 546 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 C17orf75Q9HAS0 396 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 TOPORSQ9NS56 1045 aaPredicted RBP23.1■■□□□ 1.29
VSX1-201ENST00000376707 ARHGAP28Q9P2N2 729 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 EPS15L1Q9UBC2 864 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 FBXW11Q9UKB1 542 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 FBXL21Q9UKT6 434 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 MYO10Q9HD67 2058 aa23.1■■□□□ 1.29
VSX1-201ENST00000376707 GRM5P41594 1212 aa23.09■■□□□ 1.29
VSX1-201ENST00000376707 ASTLQ6HA08 431 aaPredicted RBP23.09■■□□□ 1.29
VSX1-201ENST00000376707 DCLRE1AQ6PJP8 1040 aa23.09■■□□□ 1.29
VSX1-201ENST00000376707 TMEM105Q8N8V8 129 aa23.09■■□□□ 1.29
VSX1-201ENST00000376707 CEP120Q8N960 986 aa23.09■■□□□ 1.29
VSX1-201ENST00000376707 FLCNQ8NFG4 579 aa23.09■■□□□ 1.29
VSX1-201ENST00000376707 MYADMQ96S97 322 aa23.09■■□□□ 1.29
VSX1-201ENST00000376707 TCHPQ9BT92 498 aa23.09■■□□□ 1.29
VSX1-201ENST00000376707 TIPINQ9BVW5 301 aa23.09■■□□□ 1.29
VSX1-201ENST00000376707 TARS2Q9BW92 718 aaKnown RBP23.09■■□□□ 1.29
VSX1-201ENST00000376707 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.09■■□□□ 1.29
VSX1-201ENST00000376707 TMEM189-UBE2V1I3L0A0 370 aa23.08■■□□□ 1.29
VSX1-201ENST00000376707 GALR2O43603 387 aaPredicted RBP23.08■■□□□ 1.29
VSX1-201ENST00000376707 CLCNKBP51801 687 aa23.08■■□□□ 1.29
VSX1-201ENST00000376707 OSTNP61366 133 aa23.08■■□□□ 1.29
VSX1-201ENST00000376707 MAPK7Q13164 816 aa23.08■■□□□ 1.29
VSX1-201ENST00000376707 GET4Q7L5D6 327 aaPredicted RBP23.08■■□□□ 1.29
VSX1-201ENST00000376707 RSAD2Q8WXG1 361 aa23.08■■□□□ 1.29
VSX1-201ENST00000376707 ATOH1Q92858 354 aaPredicted RBP23.08■■□□□ 1.29
VSX1-201ENST00000376707 PTPRHQ9HD43 1115 aa23.08■■□□□ 1.29
VSX1-201ENST00000376707 FAM86C1Q9NVL1 165 aa23.08■■□□□ 1.29
VSX1-201ENST00000376707 SMIM28A0A1B0GU29 152 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 VWA3AA6NCI4 1184 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 SFI1A8K8P3 1242 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 SLC16A4O15374 487 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 TRAPPC3O43617 180 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 HNRNPA1P09651 372 aaKnown RBP eCLIP23.07■■□□□ 1.28
VSX1-201ENST00000376707 FGFR3P22607 806 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 GUCY2CP25092 1073 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 CLCN5P51795 746 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 RAD51AP2Q09MP3 1159 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 PPM1LQ5SGD2 360 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 TAS1R3Q7RTX0 852 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 CDK5RAP3Q96JB5 506 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 GOLGA2P5Q9HBQ8 144 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 SMC3Q9UQE7 1217 aa23.07■■□□□ 1.28
VSX1-201ENST00000376707 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.07■■□□□ 1.28
VSX1-201ENST00000376707 H0Y858 1186 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 ADAM12O43184 909 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 NARSO43776 548 aaKnown RBP23.06■■□□□ 1.28
VSX1-201ENST00000376707 C8AP07357 584 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 MCF2P10911 925 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 STRN3Q13033 797 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 UPP1Q16831 310 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 HYIQ5T013 277 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 SIX5Q8N196 739 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 KCTD17Q8N5Z5 321 aa23.06■■□□□ 1.28
VSX1-201ENST00000376707 NXPE3Q969Y0 559 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms