RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 C4orf32Q8N8J7 132 aa16.48■□□□□ 0.23
CLCN6-204ENST00000376491 ERMNQ8TAM6 284 aa16.48■□□□□ 0.23
CLCN6-204ENST00000376491 DEPTORQ8TB45 409 aa16.48■□□□□ 0.23
CLCN6-204ENST00000376491 GPR152Q8TDT2 470 aa16.48■□□□□ 0.23
CLCN6-204ENST00000376491 ADPGKQ9BRR6 497 aa16.48■□□□□ 0.23
CLCN6-204ENST00000376491 RPP25Q9BUL9 199 aaKnown RBP16.48■□□□□ 0.23
CLCN6-204ENST00000376491 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
CLCN6-204ENST00000376491 CA14Q9ULX7 337 aa16.48■□□□□ 0.23
CLCN6-204ENST00000376491 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
CLCN6-204ENST00000376491 GDAQ9Y2T3 454 aa16.48■□□□□ 0.23
CLCN6-204ENST00000376491 HTR4Q13639 388 aa16.47■□□□□ 0.23
CLCN6-204ENST00000376491 NBR1Q14596 966 aa16.47■□□□□ 0.23
CLCN6-204ENST00000376491 PPP2R5AQ15172 486 aa16.47■□□□□ 0.23
CLCN6-204ENST00000376491 ANGPT1Q15389 498 aa16.47■□□□□ 0.23
CLCN6-204ENST00000376491 GLRA4Q5JXX5 417 aa16.47■□□□□ 0.23
CLCN6-204ENST00000376491 TTC38Q5R3I4 469 aa16.47■□□□□ 0.23
CLCN6-204ENST00000376491 CD300LGQ6UXG3 332 aa16.47■□□□□ 0.23
CLCN6-204ENST00000376491 GRASPQ7Z6J2 395 aaPredicted RBP16.47■□□□□ 0.23
CLCN6-204ENST00000376491 NUMBLQ9Y6R0 609 aa16.47■□□□□ 0.23
CLCN6-204ENST00000376491 STK25O00506 426 aa16.46■□□□□ 0.23
CLCN6-204ENST00000376491 MUTP22033 750 aa16.46■□□□□ 0.23
CLCN6-204ENST00000376491 FSHRP23945 695 aa16.46■□□□□ 0.23
CLCN6-204ENST00000376491 CCT6AP40227 531 aaKnown RBP16.46■□□□□ 0.23
CLCN6-204ENST00000376491 ELAVL2Q12926 359 aaKnown RBP16.46■□□□□ 0.23
CLCN6-204ENST00000376491 FBXO18Q8NFZ0 1043 aa16.46■□□□□ 0.23
CLCN6-204ENST00000376491 FGF14Q92915 247 aa16.46■□□□□ 0.23
CLCN6-204ENST00000376491 NKD2Q969F2 451 aaPredicted RBP16.46■□□□□ 0.23
CLCN6-204ENST00000376491 PPP1R10Q96QC0 940 aaKnown RBP16.46■□□□□ 0.23
CLCN6-204ENST00000376491 LLPHQ9BRT6 129 aaKnown RBP16.46■□□□□ 0.23
CLCN6-204ENST00000376491 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.23
CLCN6-204ENST00000376491 TBC1D17Q9HA65 648 aa16.46■□□□□ 0.23
CLCN6-204ENST00000376491 CACNA1IQ9P0X4 2223 aa16.46■□□□□ 0.23
CLCN6-204ENST00000376491 CCL16O15467 120 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 C8AP07357 584 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 HNRNPA1P09651 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLCN6-204ENST00000376491 FGFR3P22607 806 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 FXR2P51116 673 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLCN6-204ENST00000376491 RAB33AQ14088 237 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 DCAF4L1Q3SXM0 396 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 PPM1LQ5SGD2 360 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 LIN9Q5TKA1 542 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 ATF7IP2Q5U623 682 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 RSPO2Q6UXX9 243 aaPredicted RBP16.45■□□□□ 0.22
CLCN6-204ENST00000376491 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.45■□□□□ 0.22
CLCN6-204ENST00000376491 SLC2A4RGQ9NR83 387 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 KIAA1024Q9UPX6 916 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 CITO14578 2027 aa16.45■□□□□ 0.22
CLCN6-204ENST00000376491 COL4A3Q01955 1670 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 DMDP11532 3685 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 TMEM189-UBE2V1I3L0A0 370 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 B3GAT3O94766 335 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 HOXA9P31269 272 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 TOB1P50616 345 aaPredicted RBP16.44■□□□□ 0.22
CLCN6-204ENST00000376491 CLCNKBP51801 687 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 EFNA5P52803 228 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 PARM1Q6UWI2 310 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 CEP120Q8N960 986 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 C3orf58Q8NDZ4 430 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 KIFAP3Q92845 792 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 IFT74Q96LB3 600 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 GOLGA2P5Q9HBQ8 144 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 ARHGEF3Q9NR81 526 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 DDX19AQ9NUU7 478 aaKnown RBP16.44■□□□□ 0.22
CLCN6-204ENST00000376491 DLGAP2Q9P1A6 1054 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 CDH7Q9ULB5 785 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 TNFSF13BQ9Y275 285 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 ZFP37Q9Y6Q3 630 aaPredicted RBP16.44■□□□□ 0.22
CLCN6-204ENST00000376491 FANCMQ8IYD8 2048 aa16.44■□□□□ 0.22
CLCN6-204ENST00000376491 SPTBN4Q9H254 2564 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 TKTP29401 623 aaKnown RBP16.43■□□□□ 0.22
CLCN6-204ENST00000376491 OR1D2P34982 312 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 BRCC3P46736 316 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 TRAPPC10P48553 1259 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
CLCN6-204ENST00000376491 GPC5P78333 572 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 SOX4Q06945 474 aaPredicted RBP16.43■□□□□ 0.22
CLCN6-204ENST00000376491 UPP1Q16831 310 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 AXDND1Q5T1B0 1012 aaPredicted RBP16.43■□□□□ 0.22
CLCN6-204ENST00000376491 PHLDB3Q6NSJ2 640 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 DCLRE1AQ6PJP8 1040 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 TAS1R3Q7RTX0 852 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 DAW1Q8N136 415 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 ITFG1Q8TB96 612 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 SLC7A14Q8TBB6 771 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 FGF13Q92913 245 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 SNX27Q96L92 541 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 PTPRHQ9HD43 1115 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 HCFC1R1Q9NWW0 138 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
CLCN6-204ENST00000376491 MTRRQ9UBK8 725 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 LRWD1Q9UFC0 647 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 POLIQ9UNA4 740 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 MIA3Q5JRA6 1907 aa16.43■□□□□ 0.22
CLCN6-204ENST00000376491 SMIM28A0A1B0GU29 152 aa16.42■□□□□ 0.22
CLCN6-204ENST00000376491 PP2D1A8MPX8 630 aa16.42■□□□□ 0.22
CLCN6-204ENST00000376491 E9PMD0 336 aa16.42■□□□□ 0.22
CLCN6-204ENST00000376491 I3L4J1 428 aa16.42■□□□□ 0.22
CLCN6-204ENST00000376491 K7ERI5 159 aa16.42■□□□□ 0.22
CLCN6-204ENST00000376491 DCNP07585 359 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms