RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 ZNF296Q8WUU4 475 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 TXLNGYQ9BZA5 131 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 CCDC113Q9H0I3 377 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 GJD2Q9UKL4 321 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 USP15Q9Y4E8 981 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 COL4A3BPQ9Y5P4 624 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 FRMPD4Q14CM0 1322 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 MYMKA6NI61 221 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 FAM86B1E9PN63 330 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 NUDT17P0C025 328 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 FAM86B2P0C5J1 330 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 ATP4AP20648 1035 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 PMS2P54278 862 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 MRPS9P82933 396 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 C10orf76Q5T2E6 689 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 FAM43BQ6ZT52 329 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 DNAAF5Q86Y56 855 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 NAF1Q96HR8 494 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 AIPL1Q9NZN9 384 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 ADAM22Q9P0K1 906 aa16.13■□□□□ 0.17
CCHCR1-201ENST00000376266 HTTP42858 3142 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 PVALEFA0A1B0GWK0 134 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 ZNF76P36508 570 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 CTCFP49711 727 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 RAB27AP51159 221 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 KIF22Q14807 665 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 TRIM68Q6AZZ1 485 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 GBP7Q8N8V2 638 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 NPLOC4Q8TAT6 608 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 TSC22D3Q99576 134 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 NUDT12Q9BQG2 462 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 PABPC3Q9H361 631 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 CCDC134Q9H6E4 229 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 UPP2O95045 317 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 CYP3A4P08684 503 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 CYP2B6P20813 491 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 MAP2K5Q13163 448 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 GNPTABQ3T906 1256 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 GALNTL6Q49A17 601 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 PCNX4Q63HM2 1172 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 VSIG10LQ86VR7 867 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 RASGEF1CQ8N431 466 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 TEX9Q8N6V9 391 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 DYDC1Q8WWB3 177 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 UIMC1Q96RL1 719 aa16.12■□□□□ 0.17
CCHCR1-201ENST00000376266 SLC37A4O43826 429 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 SMIM24O75264 130 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 SUN1O94901 812 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 AGTP01019 485 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 PTK2Q05397 1052 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 BNIP1Q12981 228 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 C6orf118Q5T5N4 469 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 MAEAQ7L5Y9 396 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 TPCN2Q8NHX9 752 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 USP6NLQ92738 828 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 EPB41L4BQ9H329 900 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 ARHGEF3Q9NR81 526 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 GABRQQ9UN88 632 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 MGAMO43451 1857 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 FKTNO75072 461 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 SSR1P43307 286 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 PAPOLAP51003 745 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 RPS6KA3P51812 740 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 FKBP3Q00688 224 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 PRR16Q569H4 304 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 RNF25Q96BH1 459 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 IWS1Q96ST2 819 aa16.11■□□□□ 0.17
CCHCR1-201ENST00000376266 FGGP02679 453 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 FERP16591 822 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 ITGB5P18084 799 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 CCND2P30279 289 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 CCNG1P51959 295 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 PLTPP55058 493 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 SLC29A2Q14542 456 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 GLIS3Q8NEA6 775 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 UHMK1Q8TAS1 419 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 MAML3Q96JK9 1138 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 MMTAG2Q9BU76 263 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 PAPOLBQ9NRJ5 636 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 DDX25Q9UHL0 483 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 CYP3A7-CYP3A51PA0A087WV96 503 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 HIP1RO75146 1068 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 CYP3A7P24462 503 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 CIITAP33076 1130 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 PRKCZQ05513 592 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 CEP55Q53EZ4 464 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 ALKBH5Q6P6C2 394 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 ZNF571Q7Z3V5 609 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 SOCS4Q8WXH5 440 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 FGFR1OP2Q9NVK5 253 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 SUCLA2Q9P2R7 463 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 TRIM33Q9UPN9 1127 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 DAAM1Q9Y4D1 1078 aa16.1■□□□□ 0.17
CCHCR1-201ENST00000376266 IGLV3-22A0A075B6J6 115 aa16.09■□□□□ 0.17
CCHCR1-201ENST00000376266 DPPA5A6NC42 116 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms