RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 EIF3BP55884 814 aaKnown RBP12.58□□□□□ -0.4
MCF2L-202ENST00000375597 ATP11AP98196 1134 aa12.58□□□□□ -0.4
MCF2L-202ENST00000375597 DRP2Q13474 957 aa12.58□□□□□ -0.4
MCF2L-202ENST00000375597 SNRNP35Q16560 246 aaKnown RBP12.58□□□□□ -0.4
MCF2L-202ENST00000375597 UGCGQ16739 394 aa12.58□□□□□ -0.4
MCF2L-202ENST00000375597 HHATQ5VTY9 493 aa12.58□□□□□ -0.4
MCF2L-202ENST00000375597 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-202ENST00000375597 LRRD1A4D1F6 860 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
MCF2L-202ENST00000375597 GCLCP48506 637 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-202ENST00000375597 GPS1Q13098 491 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 MTMR2Q13614 643 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 RCN2Q14257 317 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.48e-7■■■□□ 16.9
MCF2L-202ENST00000375597 MTERF2Q49AM1 385 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 LDHDQ86WU2 507 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 EPS8L1Q8TE68 723 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 ATXN2LQ8WWM7 1075 aaKnown RBP12.57□□□□□ -0.4
MCF2L-202ENST00000375597 FAM20AQ96MK3 541 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 NT5C1BQ96P26 610 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 ZCWPW1Q9H0M4 648 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 ADAM7Q9H2U9 754 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 KCNH7Q9NS40 1196 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 PCSK1NQ9UHG2 260 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 CYP3A7-CYP3A51PA0A087WV96 503 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 CD19P15391 556 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 PRKCIP41743 596 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 DCUN1D2Q6PH85 259 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 FBF1Q8TES7 1133 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 ZNF526Q8TF50 670 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-202ENST00000375597 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 CEP170P1Q96L14 293 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 RBM15Q96T37 977 aaKnown RBP eCLIP12.57□□□□□ -0.4
MCF2L-202ENST00000375597 CYTH2Q99418 400 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-202ENST00000375597 GPR88Q9GZN0 384 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 NAALADL1Q9UQQ1 740 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 PCDHB4Q9Y5E5 795 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 ZHX2Q9Y6X8 837 aa12.57□□□□□ -0.4
MCF2L-202ENST00000375597 LRRIQ4A6NIV6 560 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 hCG_1984214I3L0E3 225 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 PPIP5K2O43314 1243 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 ECE2O60344 883 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 CYP11B1P15538 503 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SREBF1P36956 1147 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 GAD2Q05329 585 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 BBS9Q3SYG4 887 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 PREPLQ4J6C6 727 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-202ENST00000375597 CYP4A22Q5TCH4 519 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SCARA3Q6AZY7 606 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 CTAGE3PQ8IX95 158 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 RHOT2Q8IXI1 618 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 ZNF713Q8N859 430 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-202ENST00000375597 CRAMP1Q96RY5 1269 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 ZNF341Q9BYN7 854 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SHCBP1LQ9BZQ2 653 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 C21orf2O43822 256 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 NQO1P15559 274 aaKnown RBP12.56□□□□□ -0.4
MCF2L-202ENST00000375597 GAP43P17677 238 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 RAD23BP54727 409 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 NCALDP61601 193 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SETDB1Q15047 1291 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SCYL3Q8IZE3 742 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 COA1Q9GZY4 146 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SEPT9Q9UHD8 586 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-202ENST00000375597 MCM8Q9UJA3 840 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-202ENST00000375597 AGTPBP1Q9UPW5 1226 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 A0A1B0GUL6 1792 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SNX3O60493 162 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 ENTPD5O75356 428 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 EPHB2P29323 1055 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 LRRC36Q1X8D7 754 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
MCF2L-202ENST00000375597 BSPRYQ5W0U4 402 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 TMEM179Q6ZVK1 233 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 DAW1Q8N136 415 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 TMEM143Q96AN5 459 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 ZNF317Q96PQ6 595 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-202ENST00000375597 KMT5AQ9NQR1 393 aa12.56□□□□□ -0.4
MCF2L-202ENST00000375597 ROBO3Q96MS0 1386 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 ATP9AO75110 1047 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 ITGB5P18084 799 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 SLC8A1P32418 973 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 PKN2Q16513 984 aaKnown RBP12.55□□□□□ -0.4
MCF2L-202ENST00000375597 FAXCQ5TGI0 409 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 TTC8Q8TAM2 541 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 ZBTB45Q96K62 511 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-202ENST00000375597 HSD17B14Q9BPX1 270 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 TMEM121Q9BTD3 319 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 DNAH12Q6ZR08 3092 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 ZBED4O75132 1171 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 PIK3CAP42336 1068 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 PTGIRP43119 386 aa12.55□□□□□ -0.4
MCF2L-202ENST00000375597 DHX34Q14147 1143 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms