RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 RASSF2P50749 326 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 SLC29A2Q14542 456 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
C9orf3-203ENST00000375315 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-203ENST00000375315 GRAMD1AQ96CP6 724 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 CEP72Q9P209 647 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 CD151P48509 253 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 MCL1Q07820 350 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 GALNT17Q6IS24 598 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 AZIN2Q96A70 460 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 TRIM51Q9BSJ1 452 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 IQCGQ9H095 443 aaKnown RBP12.97□□□□□ -0.33
C9orf3-203ENST00000375315 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 AIPL1Q9NZN9 384 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 ZNF510Q9Y2H8 683 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 TMCC1O94876 653 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 GM2AP17900 193 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 ARHGAP4P98171 946 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 SP4Q02446 784 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 ACVR2BQ13705 512 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 KPNB1Q14974 876 aaKnown RBP12.97□□□□□ -0.33
C9orf3-203ENST00000375315 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 APOBEC3FQ8IUX4 373 aaKnown RBP12.97□□□□□ -0.33
C9orf3-203ENST00000375315 RNF168Q8IYW5 571 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-203ENST00000375315 DAGLBQ8NCG7 672 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 SNX29Q8TEQ0 813 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 MAGEF1Q9HAY2 307 aa12.97□□□□□ -0.33
C9orf3-203ENST00000375315 TRAF5O00463 557 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 LGR5O75473 907 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 MYCLP12524 364 aaPredicted RBP12.96□□□□□ -0.33
C9orf3-203ENST00000375315 PTPRAP18433 802 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 SLCO1A2P46721 670 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 ASIC1P78348 528 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 OCRLQ01968 901 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 Q4G0T1 1027 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 C10orf76Q5T2E6 689 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 CNNM4Q6P4Q7 775 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 GADL1Q6ZQY3 521 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 PEX26Q7Z412 305 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 CCNJLQ8IV13 435 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 RASGEF1CQ8N431 466 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 PPFIBP2Q8ND30 876 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 NCSTNQ92542 709 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 PACSIN1Q9BY11 444 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 PCDHA12Q9UN75 941 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 USP20Q9Y2K6 914 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 DAAM1Q9Y4D1 1078 aa12.96□□□□□ -0.33
C9orf3-203ENST00000375315 A0A087X0T9 212 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.342e-9■■■■□ 24.8
C9orf3-203ENST00000375315 TBC1D12O60347 775 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 FAM228BP0C875 321 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 SMARCA1P28370 1054 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 SESN3P58005 492 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 RNASELQ05823 741 aaKnown RBP12.96□□□□□ -0.34
C9orf3-203ENST00000375315 KLHL30Q0D2K2 578 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 STK4Q13043 487 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 CNPY1Q3B7I2 92 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 LRRC15Q8TF66 581 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 CCDC28BQ9BUN5 200 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 MIS12Q9H081 205 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 CUEDC2Q9H467 287 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 ADAMTS1Q9UHI8 967 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 COMMD3-BMI1R4GMX3 469 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.34
C9orf3-203ENST00000375315 EIF2AK2P19525 551 aaKnown RBP12.95□□□□□ -0.34
C9orf3-203ENST00000375315 EPHX2P34913 555 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 PLTPP55058 493 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 SCYL3Q8IZE3 742 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 ZNF280CQ8ND82 737 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 EPS8L3Q8TE67 593 aaKnown RBP12.95□□□□□ -0.34
C9orf3-203ENST00000375315 CKAP2Q8WWK9 683 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 ERP44Q9BS26 406 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 ADARB2Q9NS39 739 aaKnown RBP12.95□□□□□ -0.34
C9orf3-203ENST00000375315 ZDHHC18Q9NUE0 388 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 TBC1D7Q9P0N9 293 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 MTRF1LQ9UGC7 380 aaKnown RBP12.95□□□□□ -0.34
C9orf3-203ENST00000375315 TMEM120BA0PK00 339 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 FAM86B1E9PN63 330 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 FAM86B2P0C5J1 330 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 CCDC166P0CW27 439 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 ATP5DP30049 168 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 DR1Q01658 176 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 VGLL4Q14135 290 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 SNX30Q5VWJ9 437 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 ECHDC2Q86YB7 292 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 TTC8Q8TAM2 541 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 CENPKQ9BS16 269 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 SPATA16Q9BXB7 569 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 BMP2KQ9NSY1 1161 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-203ENST00000375315 CIDEBQ9UHD4 219 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 RASAL2Q9UJF2 1139 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 INTUQ9ULD6 942 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 FAM187AA6NFU0 413 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 TLR2O60603 784 aa12.95□□□□□ -0.34
C9orf3-203ENST00000375315 AUHQ13825 339 aaKnown RBP12.95□□□□□ -0.34
C9orf3-203ENST00000375315 RAPGEF1Q13905 1077 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms