RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ATRNO75882 1429 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 PALLDQ8WX93 1383 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 DDX60LQ5H9U9 1706 aaKnown RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 YY1P25490 414 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 AFF3P51826 1226 aaKnown RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 BTG3Q14201 252 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 BECN1Q14457 450 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 MXD4Q14582 209 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 LRRC23Q53EV4 343 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 KLC3Q6P597 504 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 MAMDC2Q7Z304 686 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 CREG2Q8IUH2 290 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 TTC5Q8N0Z6 440 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 SUPT20HQ8NEM7 779 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 EXT2Q93063 718 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 NLRP4Q96MN2 994 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 FBXL21Q9UKT6 434 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 A6NNZ2 444 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 ATP5J2-PTCD1G3V325 749 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 SNRPA1P09661 255 aaKnown RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 ZFXP17010 805 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 HNRNPH2P55795 449 aaKnown RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 CARD18P57730 90 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 PLD1Q13393 1074 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 SCARB2Q14108 478 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 TSGA10IPQ3SY00 556 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 ZNF362Q5T0B9 420 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 TMEM53Q6P2H8 277 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 RSPH3Q86UC2 560 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 ANKRD53Q8N9V6 530 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 GIMAP5Q96F15 307 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 SEC16BQ96JE7 1060 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 EMILIN2Q9BXX0 1053 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 EHD1Q9H4M9 534 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 NRDE2Q9H7Z3 1164 aa9.67□□□□□ -0.86
UBR4-201ENST00000375218 ARGLU1Q9NWB6 273 aaPredicted RBP9.67□□□□□ -0.86
UBR4-201ENST00000375218 GOLGA6L4A6NEF3 574 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 K7EPI3 171 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 KELP23276 732 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 MAPK10P53779 464 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 MRPS15P82914 257 aaKnown RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 CYP4F22Q6NT55 531 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 C3orf67Q6ZVT6 689 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 SMARCC2Q8TAQ2 1214 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 GPRC5BQ9NZH0 403 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 TIMM22Q9Y584 194 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 A0A0G2JLW4 131 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 TP73O15350 636 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 SRGAP2O75044 1071 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 SLU7O95391 586 aaKnown RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 COL9A1P20849 921 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 TLX1P31314 330 aaPredicted RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 STK11Q15831 433 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 SKOR2Q2VWA4 1001 aaPredicted RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 NLRC3Q7RTR2 1065 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 CHD1LQ86WJ1 897 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 INTS10Q9NVR2 710 aaKnown RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 GRID1Q9ULK0 1009 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 GOLGA8IPA6NC78 632 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 MYO1CO00159 1063 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 MAPK13O15264 365 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 PROM1O43490 865 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 RNGTTO60942 597 aaKnown RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 CCDC192P0DO97 292 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 RPS2P15880 293 aaKnown RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 LIFRP42702 1097 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 CCT8P50990 548 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 USP14P54578 494 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 DHX34Q14147 1143 aaKnown RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 IKBKEQ14164 716 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 ANKS4BQ8N8V4 417 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 SMC1BQ8NDV3 1235 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 TSG101Q99816 390 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 ANGPTL2Q9UKU9 493 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
UBR4-201ENST00000375218 A0A1B0GVC2 190 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 SLFN14P0C7P3 912 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 TIGD6Q17RP2 521 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 FSCBQ5H9T9 825 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 IFT74Q96LB3 600 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 PPP1R16BQ96T49 567 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 C19orf43Q9BQ61 176 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 CFHR5Q9BXR6 569 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 TRPV4Q9HBA0 871 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 PARVGQ9HBI0 331 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 RPS6KA6Q9UK32 745 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 LRCH1Q9Y2L9 728 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 MSRB2Q9Y3D2 182 aa9.66□□□□□ -0.86
UBR4-201ENST00000375218 DUOX1Q9NRD9 1551 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 H7C0S8 307 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 OPLAHO14841 1288 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 EYA4O95677 639 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 PSMA4P25789 261 aaKnown RBP9.65□□□□□ -0.86
UBR4-201ENST00000375218 ADCY8P40145 1251 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 SLC26A5P58743 744 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 DPYSQ14117 519 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms