RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 CASTP20810 708 aaKnown RBP8.46□□□□□ -1.06
USP48-203ENST00000374732 EIF4A1P60842 406 aaKnown RBP8.46□□□□□ -1.06
USP48-203ENST00000374732 ZBTB44Q8NCP5 570 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 SSH3Q8TE77 659 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 IP6K1Q92551 441 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 HIC2Q96JB3 615 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 NCOR1P1Q9H4R4 102 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 OCEL1Q9H607 264 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 ATP10DQ9P241 1426 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 E7EVH7 732 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 TP73O15350 636 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 KLHL2O95198 593 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 LCA5LO95447 670 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 URODP06132 367 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 CLTAP09496 248 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 EEF2P13639 858 aaKnown RBP8.46□□□□□ -1.06
USP48-203ENST00000374732 ATF4P18848 351 aaPredicted RBP8.46□□□□□ -1.06
USP48-203ENST00000374732 PPARGP37231 505 aaPredicted RBP8.46□□□□□ -1.06
USP48-203ENST00000374732 CCT4P50991 539 aaKnown RBP8.46□□□□□ -1.06
USP48-203ENST00000374732 TKTL1P51854 596 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 CARD18P57730 90 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 NCAPD2Q15021 1401 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 FUT11Q495W5 492 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 MEX3BQ6ZN04 569 aaKnown RBP8.46□□□□□ -1.06
USP48-203ENST00000374732 KDELC2Q7Z4H8 507 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 DTX3Q8N9I9 347 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 CPLX3Q8WVH0 158 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 CCT6BQ92526 530 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 HDAC11Q96DB2 347 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 SARGQ9BW04 601 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 GBA3Q9H227 469 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 ADAM21Q9UKJ8 722 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 NOX1Q9Y5S8 564 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 PXDNLA1KZ92 1463 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 SPATA31A5Q5VU36 1347 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 SPATA31A7Q8IWB4 1347 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 NOTOA8MTQ0 251 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 F8W810 466 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 LGR5O75473 907 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 VAV1P15498 845 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 SFPQP23246 707 aaKnown RBP eCLIP8.45□□□□□ -1.06
USP48-203ENST00000374732 ACAT1P24752 427 aaKnown RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 ADSLP30566 484 aaPredicted RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 KRT2P35908 639 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 HNF4AP41235 474 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 THOP1P52888 689 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 OLR1P78380 273 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 HSPA14Q0VDF9 509 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 PPFIA1Q13136 1202 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 HLTFQ14527 1009 aaKnown RBP eCLIP8.45□□□□□ -1.064e-6■■■□□ 17.5
USP48-203ENST00000374732 P3H1Q32P28 736 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 CEP85LQ5SZL2 805 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 CLVS1Q8IUQ0 354 aaPredicted RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 REXO1Q8N1G1 1221 aaKnown RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 NKAPQ8N5F7 415 aaKnown RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 CFAP61Q8NHU2 1237 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 LRGUKQ96M69 825 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 YIPF4Q9BSR8 244 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 EHD3Q9NZN3 535 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 GMIPQ9P107 970 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 AMACRQ9UHK6 382 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 DACH1Q9UI36 760 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 TSPYL4Q9UJ04 414 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 TLL2Q9Y6L7 1015 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 LRRIQ3A6PVS8 624 aaPredicted RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 DCDC2CA8MYV0 355 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 FOXO6A8MYZ6 492 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 CAPN9O14815 690 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 POLR2MP0CAP2 368 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 SELLP14151 372 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 STMN1P16949 149 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 CTRB1P17538 263 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 TRIM23P36406 574 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 BAG6P46379 1132 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 COG7P83436 770 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 NFKB2Q00653 900 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 IFRD2Q12894 506 aaPredicted RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 FRG1Q14331 258 aaKnown RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 MXD4Q14582 209 aaPredicted RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 CTRB2Q6GPI1 263 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 CNNM4Q6P4Q7 775 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 CCDC149Q6ZUS6 474 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 HS2ST1Q7LGA3 356 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 EHBP1Q8NDI1 1231 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 BRF1Q92994 677 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 TTC1Q99614 292 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 GAL3ST1Q99999 423 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 ACAT2Q9BWD1 397 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 LSM14BQ9BX40 385 aaKnown RBP8.45□□□□□ -1.06
USP48-203ENST00000374732 ACPTQ9BZG2 426 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 CNGB3Q9NQW8 809 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 DACT1Q9NYF0 836 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 FAM153AQ9UHL3 310 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 ANGPTL2Q9UKU9 493 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 PCOLCE2Q9UKZ9 415 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 SNX6Q9UNH7 406 aa8.45□□□□□ -1.06
USP48-203ENST00000374732 OVOS2A0A0G2JMS6 1433 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms