RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 XXYLT1Q8NBI6 393 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 FBXO22Q8NEZ5 403 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 KIF12Q96FN5 646 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 SNX27Q96L92 541 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 C17orf80Q9BSJ5 609 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 RBAKQ9NYW8 714 aaPredicted RBP16.57■□□□□ 0.24
PFDN6-202ENST00000374607 CPSF3Q9UKF6 684 aaKnown RBP16.57■□□□□ 0.24
PFDN6-202ENST00000374607 FRMD4BQ9Y2L6 1034 aa16.57■□□□□ 0.24
PFDN6-202ENST00000374607 IL18RAPO95256 599 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 BMPR1AP36894 532 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 AFF1P51825 1210 aaKnown RBP16.56■□□□□ 0.24
PFDN6-202ENST00000374607 BCAR1P56945 870 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 ERVK-21P61565 698 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 MORC3Q14149 939 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 EPC2Q52LR7 807 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 ZBTB41Q5SVQ8 909 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 CEP135Q66GS9 1140 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 CAVIN1Q6NZI2 390 aaKnown RBP16.56■□□□□ 0.24
PFDN6-202ENST00000374607 SASS6Q6UVJ0 657 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 KCNT2Q6UVM3 1135 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 LRRC55Q6ZSA7 311 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 C11orf84Q9BUA3 381 aaPredicted RBP16.56■□□□□ 0.24
PFDN6-202ENST00000374607 CWH43Q9H720 699 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 NRDE2Q9H7Z3 1164 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 MIOSQ9NXC5 875 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 DACH1Q9UI36 760 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 FAN1Q9Y2M0 1017 aa16.56■□□□□ 0.24
PFDN6-202ENST00000374607 FNDC1Q4ZHG4 1894 aaPredicted RBP16.56■□□□□ 0.24
PFDN6-202ENST00000374607 SMIM28A0A1B0GU29 152 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 BICDL2A1A5D9 508 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 LACTBL1A8MY62 500 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 NR3C1P04150 777 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 RB1P06400 928 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 NR2F2P24468 414 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 PPM1AP35813 382 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 KRT17Q04695 432 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 SPAG1Q07617 926 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
PFDN6-202ENST00000374607 SKOR2Q2VWA4 1001 aaPredicted RBP16.55■□□□□ 0.24
PFDN6-202ENST00000374607 SLC10A6Q3KNW5 377 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 COBLL1Q53SF7 1204 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 Q7L0L9 218 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 ZNF280BQ86YH2 543 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 DEFB123Q8N688 67 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 CLP1Q92989 425 aaKnown RBP16.55■□□□□ 0.24
PFDN6-202ENST00000374607 DHTKD1Q96HY7 919 aaPredicted RBP16.55■□□□□ 0.24
PFDN6-202ENST00000374607 FNBP1Q96RU3 617 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 KCTD10Q9H3F6 313 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 SEMA6BQ9H3T3 888 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 SPG21Q9NZD8 308 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 CNTN3Q9P232 1028 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 HCSTQ9UBK5 93 aa16.55■□□□□ 0.24
PFDN6-202ENST00000374607 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
PFDN6-202ENST00000374607 CASTOR2A6NHX0 329 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 NT5C1B-RDH14C9J2C7 533 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 INPPL1O15357 1258 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 DDHD2O94830 711 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 ARHGEF15O94989 841 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 PBX3P40426 434 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 POU5F1Q01860 360 aaKnown RBP16.54■□□□□ 0.24
PFDN6-202ENST00000374607 ADAM9Q13443 819 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 TUSC3Q13454 348 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 GPM6BQ13491 265 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 BMS1Q14692 1282 aaKnown RBP16.54■□□□□ 0.24
PFDN6-202ENST00000374607 TMEM132DQ14C87 1099 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 SURF1Q15526 300 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 SNRNP35Q16560 246 aaKnown RBP16.54■□□□□ 0.24
PFDN6-202ENST00000374607 C12orf56Q8IXR9 622 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 ADSSL1Q8N142 457 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 BEST2Q8NFU1 509 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 NELFBQ8WX92 580 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 P2RX5Q93086 422 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 TMEM169Q96HH4 297 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 TSPAN18Q96SJ8 248 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 GAS2L1Q99501 681 aaPredicted RBP16.54■□□□□ 0.24
PFDN6-202ENST00000374607 TMEM175Q9BSA9 504 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 COLEC11Q9BWP8 271 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 ASB7Q9H672 318 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 DNAJB4Q9UDY4 337 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 PUF60Q9UHX1 559 aaKnown RBP16.54■□□□□ 0.24
PFDN6-202ENST00000374607 CTNND2Q9UQB3 1225 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 TRAF3IP3Q9Y228 551 aa16.54■□□□□ 0.24
PFDN6-202ENST00000374607 PRG3Q9Y2Y8 225 aaPredicted RBP16.54■□□□□ 0.24
PFDN6-202ENST00000374607 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.54■□□□□ 0.24
PFDN6-202ENST00000374607 TTC26A0AVF1 554 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 PTGESO14684 152 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 CETN3O15182 167 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 FAM189A1O60320 539 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 TADA2AO75478 443 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 KCNE1P15382 129 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 CCNE1P24864 410 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 CA8P35219 290 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 NLRP12P59046 1061 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 PAK1Q13153 545 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 TPD52L1Q16890 204 aaPredicted RBP16.53■□□□□ 0.24
PFDN6-202ENST00000374607 JADE1Q6IE81 842 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 ALKAL1Q6UXT8 129 aa16.53■□□□□ 0.24
PFDN6-202ENST00000374607 USP37Q86T82 979 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms