RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CYP4F22Q6NT55 531 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 MDM1Q8TC05 714 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 PARD3BQ8TEW8 1205 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 NEUROG2Q9H2A3 272 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 MED4Q9NPJ6 270 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 GGT7Q9UJ14 662 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 NOVA2Q9UNW9 492 aaKnown RBP11.58□□□□□ -0.56
CXCL12-203ENST00000374429 USP2O75604 605 aaPredicted RBP11.58□□□□□ -0.56
CXCL12-203ENST00000374429 JAK3P52333 1124 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 C7orf31Q8N865 590 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 RNF169Q8NCN4 708 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 GIMAP7Q8NHV1 300 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 ZWILCHQ9H900 591 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 SLC24A3Q9HC58 644 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 XPNPEP1Q9NQW7 623 aa11.58□□□□□ -0.56
CXCL12-203ENST00000374429 BZW2Q9Y6E2 419 aaKnown RBP11.58□□□□□ -0.56
CXCL12-203ENST00000374429 SCP2P22307 547 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 MCM3P25205 808 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 TUBB2AQ13885 445 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 SEL1L2Q5TEA6 688 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 NETO2Q8NC67 525 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 TUBB2BQ9BVA1 445 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 PORCNQ9H237 461 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 MYO1FO00160 1098 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 NEBLO76041 1014 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 SYF2O95926 243 aaKnown RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 CST3P01034 146 aaPredicted RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 PYGMP11217 842 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 CYP11B1P15538 503 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 UBA1P22314 1058 aaKnown RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 FECHP22830 423 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 GPC5P78333 572 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 DR1Q01658 176 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 WDR72Q3MJ13 1102 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 DPP9Q86TI2 863 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 GPD1LQ8N335 351 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 RNF10Q8N5U6 811 aaKnown RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 GOLGA5Q8TBA6 731 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 RFFLQ8WZ73 363 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 SLC10A4Q96EP9 437 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 ASCC2Q9H1I8 757 aaPredicted RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 AFG3L2Q9Y4W6 797 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 HES2Q9Y543 173 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 NDUFAB1O14561 156 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 PPP1R12AO14974 1030 aaPredicted RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 EIF3DO15371 548 aaKnown RBP eCLIP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 TMEM191BP0C7N4 346 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 HNRNPH3P31942 346 aaKnown RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 UBAP2Q5T6F2 1119 aaKnown RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 SCYL2Q6P3W7 929 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 ANKRD42Q8N9B4 389 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 TTC16Q8NEE8 873 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 OPTNQ96CV9 577 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 SEL1LQ9UBV2 794 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 RAB21Q9UL25 225 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 MAGED2Q9UNF1 606 aaPredicted RBP11.57□□□□□ -0.56
CXCL12-203ENST00000374429 DAAM1Q9Y4D1 1078 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 SBF2Q86WG5 1849 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 PFASO15067 1338 aa11.57□□□□□ -0.56
CXCL12-203ENST00000374429 E7EVH7 732 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 ARIH2O95376 493 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 LRRC14Q15048 493 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 CATSPERGQ6ZRH7 1159 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 TMEM192Q8IY95 271 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 CCDC26Q8TAB7 109 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.56□□□□□ -0.56
CXCL12-203ENST00000374429 SPATC1LQ9H0A9 340 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 LRRC4CQ9HCJ2 640 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 KCNK9Q9NPC2 374 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 WNK3Q9BYP7 1800 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 EPHB4P54760 987 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 DPY19L2Q6NUT2 758 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 SLC39A4Q6P5W5 647 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 NT5DC3Q86UY8 548 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 EMC1Q8N766 993 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 UBL4BQ8N7F7 174 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 NLRP7Q8WX94 980 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 ADAM22Q9P0K1 906 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 IVNS1ABPQ9Y6Y0 642 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 PTPRJQ12913 1337 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 MAP2K7O14733 419 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 SLC16A3O15427 465 aaKnown RBP11.56□□□□□ -0.56
CXCL12-203ENST00000374429 DGAT1O75907 488 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 KCNA2P16389 499 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 MYL6P60660 151 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 ZNF568Q3ZCX4 644 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 APOBEC3FQ8IUX4 373 aaKnown RBP11.56□□□□□ -0.56
CXCL12-203ENST00000374429 EPS8L1Q8TE68 723 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 KIFAP3Q92845 792 aa11.56□□□□□ -0.56
CXCL12-203ENST00000374429 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 TBC1D12O60347 775 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 GLRA2P23416 452 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 GNA15P30679 374 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 ADCY8P40145 1251 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 CDK17Q00537 523 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 C4orf19Q8IY42 314 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 FAM71BQ8TC56 605 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 SLC16A10Q8TF71 515 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 DYDC1Q8WWB3 177 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms