RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 ZC3H11AO75152 810 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPN20-202ENST00000374339 HOXA11P31270 313 aaPredicted RBP10.5□□□□□ -0.73
PTPN20-202ENST00000374339 KCNJ6P48051 423 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 KLK7P49862 253 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 PPP3CAQ08209 521 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 MTFR1Q15390 333 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 C1orf220Q5T0J3 134 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 KLHDC7AQ5VTJ3 777 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 EEF1DP3Q658K8 133 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 CD302Q8IX05 232 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 PLEKHO2Q8TD55 490 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 TMEM40Q8WWA1 233 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 SYN2Q92777 582 aaPredicted RBP10.5□□□□□ -0.73
PTPN20-202ENST00000374339 ARMC5Q96C12 935 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 ZNF333Q96JL9 665 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 FAM81BQ96LP2 452 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 ZNF830Q96NB3 372 aaPredicted RBP10.5□□□□□ -0.73
PTPN20-202ENST00000374339 CCDC94Q9BW85 323 aaPredicted RBP10.5□□□□□ -0.73
PTPN20-202ENST00000374339 TRIM6Q9C030 488 aaPredicted RBP10.5□□□□□ -0.73
PTPN20-202ENST00000374339 TMEM117Q9H0C3 514 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 INTS2Q9H0H0 1204 aaKnown RBP10.5□□□□□ -0.73
PTPN20-202ENST00000374339 TMX1Q9H3N1 280 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 PDE11AQ9HCR9 933 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 CHST12Q9NRB3 414 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 APEX2Q9UBZ4 518 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 PIN4Q9Y237 131 aaKnown RBP10.5□□□□□ -0.73
PTPN20-202ENST00000374339 SQORQ9Y6N5 450 aa10.5□□□□□ -0.73
PTPN20-202ENST00000374339 ANK1P16157 1881 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 RALGAPA2Q2PPJ7 1873 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 B4GALT4O60513 344 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 RPS6KA5O75582 802 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 NOL4O94818 638 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CHRNA1P02708 482 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CTSHP09668 335 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 STAG3L1P0CL83 205 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 UCHL3P15374 230 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 SLC9A1P19634 815 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 FGFR4P22455 802 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 FECHP22830 423 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 HNRNPH3P31942 346 aaKnown RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 TNFSF9P41273 254 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 GRM5P41594 1212 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 LBX1P52954 281 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 YARSP54577 528 aaKnown RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 POLR2FP61218 127 aaKnown RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CCZ1BP86790 482 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CCZ1P86791 482 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 MGAT3Q09327 533 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 LRMPQ12912 555 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 ENOX2Q16206 610 aaKnown RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 DUOXA2Q1HG44 320 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 EPC2Q52LR7 807 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 FAM26DQ5JW98 314 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 ZBTB41Q5SVQ8 909 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CYP26C1Q6V0L0 522 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 FAM43BQ6ZT52 329 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 SV2AQ7L0J3 742 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CDR2LQ86X02 465 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 NT5DC4Q86YG4 428 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 TMTC1Q8IUR5 882 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CAGE1Q8TC20 777 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 ACAP3Q96P50 834 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 SPAG5Q96R06 1193 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 TSPAN18Q96SJ8 248 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 POP1Q99575 1024 aaKnown RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 IMPG2Q9BZV3 1241 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CRISPLD2Q9H0B8 497 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 GANQ9H2C0 597 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 ASB7Q9H672 318 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 PLEKHA5Q9HAU0 1116 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 TOPORSQ9NS56 1045 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 TRMT13Q9NUP7 481 aaKnown RBP10.49□□□□□ -0.73
PTPN20-202ENST00000374339 RAB20Q9NX57 234 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 PLAGL2Q9UPG8 496 aa10.49□□□□□ -0.73
PTPN20-202ENST00000374339 CITO14578 2027 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 ESPNB1AK53 854 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 EPHB6O15197 1021 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 TLR3O15455 904 aaKnown RBP10.48□□□□□ -0.73
PTPN20-202ENST00000374339 PHACTR2O75167 634 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 SGPL1O95470 568 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 NPTXRO95502 500 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 MYCP01106 439 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-202ENST00000374339 TNNC2P02585 160 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 TFRCP02786 760 aaKnown RBP10.48□□□□□ -0.73
PTPN20-202ENST00000374339 TMEM191BP0C7N4 346 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 HSPA1AP0DMV8 641 aaKnown RBP10.48□□□□□ -0.73
PTPN20-202ENST00000374339 HSPA1BP0DMV9 641 aaKnown RBP10.48□□□□□ -0.73
PTPN20-202ENST00000374339 PIK3CAP42336 1068 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 VASPP50552 380 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-202ENST00000374339 CDK7P50613 346 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 OSTNP61366 133 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 CDK17Q00537 523 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 BIRC3Q13489 604 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 BFSP2Q13515 415 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 MEA1Q16626 185 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 TRIM71Q2Q1W2 868 aaKnown RBP10.48□□□□□ -0.73
PTPN20-202ENST00000374339 ZACNQ401N2 412 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 SEZ6Q53EL9 994 aa10.48□□□□□ -0.73
PTPN20-202ENST00000374339 WDR44Q5JSH3 913 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms